Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00490 ATGCCAATGAAGGGTAAAAGTGTATGGAGATTGAAAGAGTTCAAGAAGGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATTTGGTCTCTCTCATAGGATTCTGCAACAACAAAGATGAGAAGATTATTGTGTACAAATACATGCCCAATGGATCTCTCTATGATCATCTACGCAATAGGGAGATGGAACCACTCTCATGGAAGAAAAGGCTAGAGATCTGCATAAGAGCAGCACGTGGTGTGCACTACCTCCACACAGGAGCCAAGCGCACCATCATTCACCGTGACATCAGTCCCTCTAAGATTTTTTTGGATAGCAATATGGTGCCCAAAATCTCAGATTTAGGGTTTTGCTTGCAGGGACCATTGTTTACATCATAG 384 0.4323 MPMKGKSVWRLKEFKKEIELLCQLRHPNLVSLIGFCNNKDEKIIVYKYMPNGSLYDHLRNREMEPLSWKKRLEICIRAARGVHYLHTGAKRTIIHRDISPSKIFLDSNMVPKISDLGFCLQGPLFTS* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00490 127 Pfam Protein tyrosine and serine/threonine kinase 11 119 IPR001245 GO:0004672|GO:0006468
Rops8g00490 127 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00490 127 Gene3D Transferase(Phosphotransferase) domain 1 3 125 - -
Rops8g00490 127 SUPERFAMILY Protein kinase-like (PK-like) 10 122 IPR011009 -
Rops8g00490 127 PANTHER OS07G0166700 PROTEIN 10 121 IPR045272 GO:0004714|GO:0006468
Rops8g00490 127 SMART tyrkin_6 1 125 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00490 Rops-Chr8 9069032 9069415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00490 12 127 Receptor kinase-like Gene Family AT5G38990 57.983 2.54e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00490 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00490 - - lja:Lj1g3v3039470.1 180.259