Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00488 ATGGGGGTTTCTTCGAGTTTTTCTTGTTTCCGTAAGTTAAAGGAAACAAATTCATCCTCCAATCAAATAAATGTCTCAGAAAAACAACCTTCAATCATTATAGAAGAACATTGCCACCGCTTTCCACTTGCAGAGTTAAAATTAGCAACGAGCAACTTCAACCAAAATTTGGTAATTGGACATGACACATTCGGCATCATTTACAAAGGTCATCTGGAAAAAAGTGATATTGCGGTTGCCATCAAACGGAGGAATAAGTACTCTGCTCATGGTCTCTCGGAGTTTAAGAACGAGGTTGTTTTGCTTAGTCAACTCCACCACCCCAATCTCATGTCTTTAATTGGATTTTGTATTGAAAGAGATGAGCTTATTCTCGTACATGAGTACATGTCTAATGGTTACCTCCATGATCACATATATCATATGAACAGTCCCAGAAGAGTTAATCCACTTGTGCGGAAGAGGAGGCTACAAATTTGCATAGAAGTGGTGAGTCCAAAGGAGCTAAGGTACCTTTTTGAGGAATACATAATTAACCACAATCATTCACTGGAGTCAAATGCAGAGAAAATTGTTGATCCATTTCTTAAATCAAAAATTGCTCCAGAGTGTTGGAAAACATTCATTGGCATAACTGAGAGATGTTTGCTTGATGATGGAATAAAACGACCATCCATGGGTGAAGTGCAGGTGGAACTTGAGCATGCAATGCACTGCAATTGCAAGAGGAAGCAGATACCAAGATTGGTTGCTAAACTTCTGATCCCCCATTATCTCCCCAATTGGGTTTAA 792 0.3914 MGVSSSFSCFRKLKETNSSSNQINVSEKQPSIIIEEHCHRFPLAELKLATSNFNQNLVIGHDTFGIIYKGHLEKSDIAVAIKRRNKYSAHGLSEFKNEVVLLSQLHHPNLMSLIGFCIERDELILVHEYMSNGYLHDHIYHMNSPRRVNPLVRKRRLQICIEVVSPKELRYLFEEYIINHNHSLESNAEKIVDPFLKSKIAPECWKTFIGITERCLLDDGIKRPSMGEVQVELEHAMHCNCKRKQIPRLVAKLLIPHYLPNWV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00488 263 PANTHER OS07G0166700 PROTEIN 183 239 IPR045272 GO:0004714|GO:0006468
Rops8g00488 263 Gene3D Transferase(Phosphotransferase) domain 1 166 250 - -
Rops8g00488 263 Gene3D Phosphorylase Kinase; domain 1 13 129 - -
Rops8g00488 263 ProSiteProfiles Protein kinase domain profile. 53 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00488 263 SUPERFAMILY Protein kinase-like (PK-like) 19 230 IPR011009 -
Rops8g00488 263 Pfam Protein tyrosine and serine/threonine kinase 58 164 IPR001245 GO:0004672|GO:0006468
Rops8g00488 263 FunFam receptor-like protein kinase FERONIA 13 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00488 Rops-Chr8 9038053 9039119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00488 185 245 Receptor kinase-like Gene Family AT1G30570 39.683 1.83e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00488 PK_Tyr_Ser-Thr 5.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00488 - - ahf:112797896 220.32