Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00484 ATGGTCCTAACAGCACAGCAAGACAGCAGCACAGCCATGTGTACAGCTGCACAGACACACTACTGCACACTTAAAAAGATGAAGCTAAACCACTCTGAAGGAGTAGACGACAGCATCAAAGTAGAAAATTTAAAGCTTTCTTTCAGCCTTCATCCTCAGGTTCTTATCCCCCATGAAATCTTATCTGATACTCAAGATCTTTCTATTCTCTCCTATCATCTTCATGTTTCCTTGTCTCATCATATTTTTGCACTTCCAATCTTTCTTGATAGTATTGTTGTTGCGTGGGGTGCTGTCTTGATTTCAGTGACATTGATTCTTCTGTTTGGTGAGGTGGGACCAGCATTGGCCTGTGGCAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTATATATGCAGCAAAGCTATTTCATGAGGCTGGACTTCCTGCTGGTGTTTTGAATATAGTATCAGGCTTTGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCATATGGATGTAGATAAGCTTGCTTTATGCACAATTGCTCTTTGGAGTAGTGTCCCTCATATGCTTCTGCAGCATCAGATTTCAATGAAGGCCTGA 597 0.4255 MVLTAQQDSSTAMCTAAQTHYCTLKKMKLNHSEGVDDSIKVENLKLSFSLHPQVLIPHEILSDTQDLSILSYHLHVSLSHHIFALPIFLDSIVVAWGAVLISVTLILLFGEVGPALACGNTIVLKTAEQTPLSAIYAAKLFHEAGLPAGVLNIVSGFGPTAGAALASHMDVDKLALCTIALWSSVPHMLLQHQISMKA* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00484 198 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 104 176 - -
Rops8g00484 198 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 91 178 IPR016162 GO:0016491
Rops8g00484 198 Pfam Aldehyde dehydrogenase family 105 176 IPR015590 GO:0016491
Rops8g00484 198 SUPERFAMILY ALDH-like 105 175 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00484 Rops-Chr8 9002335 9008826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00484 81 176 Aldehyde Dehydrogenase Gene Family AT3G48000 65.625 4.97e-33 122