Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00483 ATGGTTCTCAAGTATTTGGGATTCTGCCGTTCAAAGCATACAAGTTCATCTCAGAGACACTATCCAACAGTAATAGAAGAGCTATGCCCTCAATTTTCTCTGGCGGATCTCAGGAAATCAACCAACAACTTTGATGAAAATCAAATAGTTGGACGTGGAGGCCTTGGTACAGTATATAAAGGTTGTTTACAACACAATGGTAGGGGTGATTATACAGTTGCAATCAAGCGAATTTATGCATGCACTGAGAAAGAATTGAAAGAGTTCAAGAATGAAATTGAGTTGCTTTGCCAACTTCATCATCCTAATTTGGTCAGTTTAATAGGATTTTGTGATCGCAAAAATGAGAAGCTTATTGTGTATGAGTACATGGCCAATGGAGCTCTCTATGATCGCCTATATGGTATAACAAAGAAACCACTTTCATGGAAGTTAAGGTTAAAGATCTGCATTGGAACGGCACGTGGACTACACTTCCTTCATACTGGAGCCAAGCGCACTATTTTCCATCGTGACATACAACCTCGTAAAATTTTGTTGGATGACAATATGGTGCCCAAACTCTCAGACTTACGGTTTTCCTTACAGGGACCATTGTTTACATCAAAGCCAAAACCAAAGTCCATACTAAATGATAACTTTACAGGTACCTATGGTTATGCGGCCCCTGAGATTTTACAAAACAAAACTGTAACAGATAAGTGCGACATTTACTCTTTTGGTATAGTTCTACTGGAAATGGTATGCAGGGACAAGCTAAAAATTGTTGAGAAGAGGCAGAGGCACCCTGTGGAGGAGAATATTGATCCAATTCTCAAGCGAAAGATTGCACCAAAGTGTTGGGAGACATTCGTGGATGTCACGAAAAGATGCTTGAAGTATGACCCAAATGAGCGACCGACAATAGGTGAAGTGGAGGTGCTACTTGAGCTTGCTCTGTCACTACAGGAAGAAGCAGATATCAGAAACACCAGTGATGATCATTATACTTTAATGTCTACAACAATTATTGATCCTCCACCACAAGAAGCACCAATTTTAGCCAAAAATAAACTTGATGGATGA 1065 0.3981 MVLKYLGFCRSKHTSSSQRHYPTVIEELCPQFSLADLRKSTNNFDENQIVGRGGLGTVYKGCLQHNGRGDYTVAIKRIYACTEKELKEFKNEIELLCQLHHPNLVSLIGFCDRKNEKLIVYEYMANGALYDRLYGITKKPLSWKLRLKICIGTARGLHFLHTGAKRTIFHRDIQPRKILLDDNMVPKLSDLRFSLQGPLFTSKPKPKSILNDNFTGTYGYAAPEILQNKTVTDKCDIYSFGIVLLEMVCRDKLKIVEKRQRHPVEENIDPILKRKIAPKCWETFVDVTKRCLKYDPNERPTIGEVEVLLELALSLQEEADIRNTSDDHYTLMSTTIIDPPPQEAPILAKNKLDG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00483 354 Gene3D Transferase(Phosphotransferase) domain 1 124 335 - -
Rops8g00483 354 FunFam Receptor-like protein kinase ANXUR2 9 123 - -
Rops8g00483 354 ProSiteProfiles Protein kinase domain profile. 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00483 354 SUPERFAMILY Protein kinase-like (PK-like) 20 313 IPR011009 -
Rops8g00483 354 Pfam Protein tyrosine and serine/threonine kinase 47 306 IPR001245 GO:0004672|GO:0006468
Rops8g00483 354 Coils Coil 79 99 - -
Rops8g00483 354 FunFam Receptor-like protein kinase ANXUR2 124 332 - -
Rops8g00483 354 Gene3D Phosphorylase Kinase; domain 1 4 123 - -
Rops8g00483 354 PANTHER OS07G0166700 PROTEIN 29 316 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00483 Rops-Chr8 9001838 9003243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00483 11 320 Receptor kinase-like Gene Family AT3G51550 38.889 4.97e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00483 PK_Tyr_Ser-Thr 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00483 - - gmx:100779112 492.271