Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00479 ATGGTGCCCAAACTCTCAGACTTGCGGTTTTCCTTACAGGGACCACTGTTTACATCAAAGCCAAAACCAAAGTCCATATTAAATGATAACTTTACAGGTACATATGGTTATGTGGCCCCTGAGATTTTACAAAACAAAACAGTAACAGATAAGTGTGATATTTACTCTTTTGGTATAGTTCTACTGGAAATGGTATGCAGAGACAAGCTAAAAATTGTTGAGAAGAGGCAGAGGCACCCTGTGGAGGAGAATATTGATCCAATTCTCAAGGGAAAGATTGCACCAAAGTGTTGGGAGATATTCGTGGATGTCACGAAAAGATGCTTGAAGTATGACCCAAATGAGCGACCAACAATAGGTGAAGTGGAGGTGCTACTTGAGCTTGCTCTGTCACTGCAGGAAGAAGCAGATATCACAAACACCAGTGATGGTCATTATACTTTAATGTCTACAACCATTATTGATCCTCCACCATAA 477 0.4046 MVPKLSDLRFSLQGPLFTSKPKPKSILNDNFTGTYGYVAPEILQNKTVTDKCDIYSFGIVLLEMVCRDKLKIVEKRQRHPVEENIDPILKGKIAPKCWEIFVDVTKRCLKYDPNERPTIGEVEVLLELALSLQEEADITNTSDGHYTLMSTTIIDPPP* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00479 158 PANTHER OS07G0166700 PROTEIN 1 133 IPR045272 GO:0004714|GO:0006468
Rops8g00479 158 Pfam Protein kinase domain 24 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00479 158 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00479 158 SUPERFAMILY Protein kinase-like (PK-like) 2 127 IPR011009 -
Rops8g00479 158 Gene3D Transferase(Phosphotransferase) domain 1 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00479 Rops-Chr8 8928773 8930031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00479 2 137 Receptor kinase-like Gene Family AT3G51550 32.000 3.65e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Rops8g00479 Pkinase 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00479 - - gmx:100779112 228.024