Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00478 ATGGTTCTCAAATGTTTGGGTTTGTGCCGTTCAAAGCATATCAAGTCTGAGTTCCCATCATCTGGTCCAACAGTAATAGAAGAGCTATGCCATCATTTTTCTCTGGCTGATCTTAGGAAATCAACCAACAACTTTGATGAAAATCGAATAATTGGAGAGGGAGGCTCTAGTACAGTATACAAAGGTTGTCTCCAGCATAACGTTGCCACAGATTGTACAGTAGCAGTGAAGCGAATGAAGGGTAAAAGTGTATGGAGATTGAAAGAGTTCAAGAAGGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATTTAGTCTCTCTCATAGGATTCTGCAACAACAAAGATGAGAAGATTATTGTGTACAAATACATGCCCAATGGATCTCTCTATGATCATCTACGCAATAGTGAGATGGAACCTCTCTCATGGAAGAAAAGGCTAGAGATCTGCATAGGAGCAGCACGTGGGGTGCACTACCTCCACACAGGAGCCAAGCGCACCATCATTCACCGTGACATCAGTCCCTCTAAGATATTTTTGGATAGCAATATGGTGCCCAAAATCTCAGATTTCGGGTTTTGCTTGCAGGGACCATTGTTTACATCAAAGCCAAAACCTATTGAAATAGAATATCCAGCAGGTACAACAGGTTTCTTAGCTCCTGAGAATTTCTCGAACTCCTTGAGCGGCTTGGCAGATAGAAGTGACGTTTATTCCTTTGGCGCGGTTCTAATTGACGTGATAAGTGCAAAGTCATATCACAAAATTTTAATGGAGATGGTCGAGGAGCTTGCAAGAGAAGAATTAGAAACGCCTATTCCTTCTGTACTTTACCGAAGGCTCCGAGCTGGGGAGATTATTGATCCGGTTCTTGCAGGAAAAATTGCACCAGAGTGTTTGGAATTATATATAGATATCATTGACCGTTGCATGAAGTTTGAACCAAATGAACGACCAGCAATGGGCGAAGTAGAGGTGGAACTTGAACATGCTCTGACTTTGCAACAGGAAGCAGATGCAAGGAACACTGGTGGTGATTGTAGCTTATTATCCCCCAGCATTACTCAACCTTAA 1077 0.4262 MVLKCLGLCRSKHIKSEFPSSGPTVIEELCHHFSLADLRKSTNNFDENRIIGEGGSSTVYKGCLQHNVATDCTVAVKRMKGKSVWRLKEFKKEIELLCQLRHPNLVSLIGFCNNKDEKIIVYKYMPNGSLYDHLRNSEMEPLSWKKRLEICIGAARGVHYLHTGAKRTIIHRDISPSKIFLDSNMVPKISDFGFCLQGPLFTSKPKPIEIEYPAGTTGFLAPENFSNSLSGLADRSDVYSFGAVLIDVISAKSYHKILMEMVEELAREELETPIPSVLYRRLRAGEIIDPVLAGKIAPECLELYIDIIDRCMKFEPNERPAMGEVEVELEHALTLQQEADARNTGGDCSLLSPSITQP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00478 358 ProSiteProfiles Protein kinase domain profile. 45 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00478 358 Gene3D Phosphorylase Kinase; domain 1 9 124 - -
Rops8g00478 358 Gene3D Transferase(Phosphotransferase) domain 1 125 348 - -
Rops8g00478 358 FunFam Receptor-like protein kinase ANXUR2 8 124 - -
Rops8g00478 358 ProSitePatterns Protein kinases ATP-binding region signature. 51 77 IPR017441 GO:0005524
Rops8g00478 358 PANTHER OS07G0166700 PROTEIN 29 336 IPR045272 GO:0004714|GO:0006468
Rops8g00478 358 SUPERFAMILY Protein kinase-like (PK-like) 19 328 IPR011009 -
Rops8g00478 358 Pfam Protein tyrosine and serine/threonine kinase 48 327 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00478 Rops-Chr8 8908529 8909680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00478 28 350 Receptor kinase-like Gene Family AT3G51550 41.411 5.32e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00478 PK_Tyr_Ser-Thr 9.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00478 - - lja:Lj1g3v3029330.1 374.4