Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00474 ATGGTTCTCAAGTATTTGGGATTCTTCCGTTCAAAGCATACAAGTTCATCTCAGAGGCACTATCCAACAGTAATAGAAGAGCTATGCCCTCAATTTTCTCTGAAGGATCTCAGGAAATCAACCAACAACTTTGATGAAAATCGAATAGTTGGACGTGATAGTAGAGCTACAGTGTATAAAGGTTGTCTGCAACACAATGGTACTGGTGATTATACAGTCGCGATCAAGCGAATGTATGCATGCACTGACAAAGAATTGAAAGAGTTCAAGAAAGAAATTGAGTTGCTTTGCCAACTTCATCATCCTAATTTGCACACTTTAATAGGATTTTGTGACCGCAAAAATGAGAAGATTATTGTGTATGAGTACATGGCCAATGGAGCTCTCTATGATCACCTATATGGTATAACAAAGAAACCACTTTCATGGAAGCTAAGGTTAAAGATCTGCATAGGAACAGCACGTGGACTACACTTCCTTCATACAGGAGCCAAGCGCACTATTTTTCATCGCGACATACAACCTCGTAAAATTTTATTGGATGACAATATGGTGCCCAAACTCGCAGACTTGCGGTTTTCCTTACAGGGACCCTTGTTTACATCAAAGCCAAAACCAAAGTCCATACTAAATGATAACTTTACAGGTACATATGGTTATGTGGCCCCTGAGATTTTACAAAACAAAACAGTAACAGATAAGTGTGACATTTACTCTTTTGGTATAGTTCTACTGGAAATGGTATGCAGGGACAAGCTAAAAATTGTTGAGAAGAGGCAGAGGCACCATGTGGAGGAGAATATTGATCCAATTCTCAAGGGAAAGATTGCACCAAAGTGTTGGGAGATATTCGTGGATGTAACGAAAAGATGCTTGAAGTATGACCCAAATGAGCGACCGACAATAGGTGAAGTGGATGTGCTACTTGAGCTTGCTCTGTCACTACAGGAAGAAGCAGATATCAGAAACACCAGTGATGATCATTATACTTTAATGTCTACAACCATTATTGATCCTCCACCATAA 1026 0.3957 MVLKYLGFFRSKHTSSSQRHYPTVIEELCPQFSLKDLRKSTNNFDENRIVGRDSRATVYKGCLQHNGTGDYTVAIKRMYACTDKELKEFKKEIELLCQLHHPNLHTLIGFCDRKNEKIIVYEYMANGALYDHLYGITKKPLSWKLRLKICIGTARGLHFLHTGAKRTIFHRDIQPRKILLDDNMVPKLADLRFSLQGPLFTSKPKPKSILNDNFTGTYGYVAPEILQNKTVTDKCDIYSFGIVLLEMVCRDKLKIVEKRQRHHVEENIDPILKGKIAPKCWEIFVDVTKRCLKYDPNERPTIGEVDVLLELALSLQEEADIRNTSDDHYTLMSTTIIDPPP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00474 341 Gene3D Transferase(Phosphotransferase) domain 1 124 335 - -
Rops8g00474 341 Gene3D Phosphorylase Kinase; domain 1 6 123 - -
Rops8g00474 341 Pfam Protein tyrosine and serine/threonine kinase 48 305 IPR001245 GO:0004672|GO:0006468
Rops8g00474 341 ProSiteProfiles Protein kinase domain profile. 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00474 341 PANTHER OS07G0166700 PROTEIN 29 316 IPR045272 GO:0004714|GO:0006468
Rops8g00474 341 FunFam Receptor-like protein kinase ANXUR2 124 332 - -
Rops8g00474 341 SUPERFAMILY Protein kinase-like (PK-like) 20 313 IPR011009 -
Rops8g00474 341 FunFam Receptor-like protein kinase ANXUR2 9 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00474 Rops-Chr8 8845374 8846479 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00474 11 320 Receptor kinase-like Gene Family AT3G51550 37.654 8.57e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00474 PK_Tyr_Ser-Thr 7.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00474 - - gmx:100779112 474.937