Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00470 ATGGTTCTCAAGTATTTGGGATTCTGCCGTTCAAAGCATACAAGTTCATCTCAGAGGCACTATCCAACAGTAATAGAAGAGCTATGCCCTCAATTTTCTCTGGCGGATCTCAGGAAATCAACCAACAACTTTGATGAAAATCGAATAGTTGGACGTGGAGGCCTTGCTGCAGTGTATAAAGGTTGTCTGCAACACAATGGTACTGGTGATTATACAGTCGCGATCAAGCGAATTTATGCATGCACTGACAAAGAATTGAAAGAGTTCAAGAAAGAAATTGAGTTGCGTTGCCAACTTCATCATCCTAATTTGGTCACTTTAATAGGATTTTGTGACCGCAAAGATGAGAAGATTATTGTGTATGAAGGACCACTGTTTACATCAAAGCCAAAACCAAAGTCCATACTAAATGATAACTTTACAGGTACATATGGTTATGTGGCCCCTGAGATTTTACAAAACGAAACAGTAACAGATAAGTGTGACATTTACTCTTTTGGTATAGTTCTACTGGAAATGGTATGCAGGGACAAGCTAAAAATTGTTGAGAAGAGGCAGAGGCACCCTGTGGAGGAGAATATTGATCCAATTCTCAAGGGAAAGATTGCACCAAAGTGTTGGGAGATATTCGTGGATGTCACGAAAAGATGCTTGAAGTATGACCCTAATGAGCGACCGACAATAGGTGAAGTGGAAGTGCTACTTGAGCTTGCTCTGTCACTACAGGAAGAAGCAGATATCAGAAACACCAGTGATGATCATTATACTTTAATGTCTACAACCATTATTGATCCTCCACCATAA 804 0.4005 MVLKYLGFCRSKHTSSSQRHYPTVIEELCPQFSLADLRKSTNNFDENRIVGRGGLAAVYKGCLQHNGTGDYTVAIKRIYACTDKELKEFKKEIELRCQLHHPNLVTLIGFCDRKDEKIIVYEGPLFTSKPKPKSILNDNFTGTYGYVAPEILQNETVTDKCDIYSFGIVLLEMVCRDKLKIVEKRQRHPVEENIDPILKGKIAPKCWEIFVDVTKRCLKYDPNERPTIGEVEVLLELALSLQEEADIRNTSDDHYTLMSTTIIDPPP* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00470 267 SUPERFAMILY Protein kinase-like (PK-like) 20 239 IPR011009 -
Rops8g00470 267 FunFam Receptor-like protein kinase ANXUR2 9 123 - -
Rops8g00470 267 PANTHER OS07G0166700 PROTEIN 29 122 IPR045272 GO:0004714|GO:0006468
Rops8g00470 267 Gene3D Transferase(Phosphotransferase) domain 1 120 261 - -
Rops8g00470 267 Pfam Protein tyrosine and serine/threonine kinase 47 122 IPR001245 GO:0004672|GO:0006468
Rops8g00470 267 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00470 267 Pfam Protein kinase domain 137 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00470 267 Gene3D Phosphorylase Kinase; domain 1 4 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00470 Rops-Chr8 8826155 8828581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00470 13 265 Receptor kinase-like Gene Family AT1G51800 25.364 6.86e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops8g00470 Pkinase 4.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00470 - - gmx:100819625 347.821