Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00466 ATGGGCCTAACAGCACAGCAAGACAGCAGCACAGCCTTGTGTACAGCTGCACAGACACTACTGCACCGAACACCACCTATGCATACTTTAAAACATGAAGCTAAACCAGTAACACTACTGCATACAAAAGCTAAATCAGAAACTGTTTTAAAGCATGTTCTTATACCCCATGAAATCTTATCTGATATTCAAGATCTTTCTATTCTCTCCTATCATCTTCATGTTTCCTTCTCTCATCATATCTTTGCACTTACAAACTTTCTTGATAGTATTGTTGTTGCGTGGGGTGCTGTCTTGATTTCAGTGACATTGATTCTTCTGTTTGGTGAGGTGGGACCAGCATTGGCCTGTGGCAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTATATATGCAGCAAAGCTATTTCATGAGGCTGGACTTCCTGCTGGTGTTTTGAATATAGTATCAGGCTTTGGTCCAACTGCCGGTGCTGCTCTTGCTAGTCATATGGATGTAGATAAGCTTGCTTTATGCACAATTGCTCTTTGGAGTAGTGTCCCTCATATGCTTCTGCAGCATCAGATTTCAATGAAGGCCTGA 594 0.4192 MGLTAQQDSSTALCTAAQTLLHRTPPMHTLKHEAKPVTLLHTKAKSETVLKHVLIPHEILSDIQDLSILSYHLHVSFSHHIFALTNFLDSIVVAWGAVLISVTLILLFGEVGPALACGNTIVLKTAEQTPLSAIYAAKLFHEAGLPAGVLNIVSGFGPTAGAALASHMDVDKLALCTIALWSSVPHMLLQHQISMKA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00466 197 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 90 177 IPR016162 GO:0016491
Rops8g00466 197 Pfam Aldehyde dehydrogenase family 104 175 IPR015590 GO:0016491
Rops8g00466 197 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 102 175 - -
Rops8g00466 197 SUPERFAMILY ALDH-like 104 174 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00466 Rops-Chr8 8751849 8757531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00466 104 175 Aldehyde Dehydrogenase Gene Family AT3G48000 81.944 2.59e-32 120