Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00464 ATGAAGGGTCAAAGTGTATGGAGATTGGAAGACTTCAAGAAGGAAATTGAGTTGCTTTGTCAGCTTCGTCACCCTAATTTGGTCTCTCTTATAGGATTCTGCAACCACAAAGATGAGAATGTTATTGTGTACGAATACATGTCCGATGGATCTCTCCATGATCATTTACACAATAGGCGAGATGGAACCACTCTCATGGAAGAAAAGGCTAGAGATCTGCATAGGAGCAAAGACGGACCATTGTTTACATCAAAGCCAAAACCTATAGAAATAGACAGAATTATAGGTACATATGATTTCTTAGCTCCTGAGTATGCCTTATGGGGCAGCTTGACAGATAGAAGTGACGTTTATTCCTTTGGCGTGGTTCTAATTGAAGTGATATGTGCAAAGTCATATACAGAAATTTCAAGGGAGATGATCGAGTTTCAAAGAGAAGAATTAGAAACGACTGTTGGTTCGGAGATGAGCGAGCTTCCAAGAGAAGAATTTGAAACGCCCATTTGTTTGGAAATTAGCGAGCTTCCAAGGGAAAAATTTGAAAAGCCTATTTGTTCGGAAATGAGCCGGCTTCCAAGTGAAGAATTTGAAAAGCCTATTCGTTCTGCTGATACGCATATGTCTCACGTTATACTAAGGCTCCGAGCTTGGGAGATTATTGATCCGCTTCTTGCAGGAAAAATTGCACCAGAGTGTTTGGAATTATATATAGATATCATAGACAGGTGCGTGAAGTATGAACCAAATGAGCGATCAGCAATGGGCGAAGTAGAGGTGGAACTTGAACATGCTCTGACTTTGCAACAGAATGCAGATGCAAGGAACACTGGTGGTGATTATAGCTTATTATCCCCCAGCATTACTCAGCCTTTGTGA 876 0.4098 MKGQSVWRLEDFKKEIELLCQLRHPNLVSLIGFCNHKDENVIVYEYMSDGSLHDHLHNRRDGTTLMEEKARDLHRSKDGPLFTSKPKPIEIDRIIGTYDFLAPEYALWGSLTDRSDVYSFGVVLIEVICAKSYTEISREMIEFQREELETTVGSEMSELPREEFETPICLEISELPREKFEKPICSEMSRLPSEEFEKPIRSADTHMSHVILRLRAWEIIDPLLAGKIAPECLELYIDIIDRCVKYEPNERSAMGEVEVELEHALTLQQNADARNTGGDYSLLSPSITQPL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00464 291 Gene3D Transferase(Phosphotransferase) domain 1 74 281 - -
Rops8g00464 291 Pfam Protein tyrosine and serine/threonine kinase 9 66 IPR001245 GO:0004672|GO:0006468
Rops8g00464 291 Pfam Protein tyrosine and serine/threonine kinase 98 141 IPR001245 GO:0004672|GO:0006468
Rops8g00464 291 SUPERFAMILY Protein kinase-like (PK-like) 10 258 IPR011009 -
Rops8g00464 291 Gene3D Transferase(Phosphotransferase) domain 1 2 73 - -
Rops8g00464 291 PANTHER OS07G0166700 PROTEIN 74 268 IPR045272 GO:0004714|GO:0006468
Rops8g00464 291 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00464 Rops-Chr8 8746307 8747382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00464 9 282 Receptor kinase-like Gene Family AT3G51550 27.070 7.27e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00464 PK_Tyr_Ser-Thr 9.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00464 - - lja:Lj0g3v0196439.1 209.149