Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00455 ATGACACATTCGGCTTCATTTACAAAGGTCATCTGGGAAAAAGTGATATTGTGTTGTGGTTTTGCCATCAAACGGTGGAATAAGCATTCTGCTCATGGTCTCTCGGATTTTAAAAACGAGGTTGTTTTACTTTGTCAACTCCACCACCCCAATCTCATGTCTTTAATTGGATTTTGTATTGAAAGAGATGAGCTTATTCTCGTACATGAGTACATGTCTAACGGTTACCTCCATGATCACATATATCATATGAAGAGTTCCAGAAGAGTTAATCCACTTGCGTGGAAGAGGAGGCTACAAATTTGCATAGGTGTGGCACGTGCACTACACTATCTTCATGCAGGAGCCAAATATGCGATCATACATCGTGACCTTCATATACGAAACATTTTTTTGGATGAAAACTAG 408 0.3946 MTHSASFTKVIWEKVILCCGFAIKRWNKHSAHGLSDFKNEVVLLCQLHHPNLMSLIGFCIERDELILVHEYMSNGYLHDHIYHMKSSRRVNPLAWKRRLQICIGVARALHYLHAGAKYAIIHRDLHIRNIFLDEN* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00455 135 Pfam Protein tyrosine and serine/threonine kinase 21 135 IPR001245 GO:0004672|GO:0006468
Rops8g00455 135 Gene3D Transferase(Phosphotransferase) domain 1 73 135 - -
Rops8g00455 135 PANTHER OS07G0166700 PROTEIN 21 135 IPR045272 GO:0004714|GO:0006468
Rops8g00455 135 SUPERFAMILY Protein kinase-like (PK-like) 19 135 IPR011009 -
Rops8g00455 135 Gene3D Phosphorylase Kinase; domain 1 13 72 - -
Rops8g00455 135 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00455 Rops-Chr8 8624663 8625070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00455 22 135 Receptor kinase-like Gene Family AT1G30570 53.509 2.25e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00455 PK_Tyr_Ser-Thr 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00455 - - adu:107473893 159.458