Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00454 ATGGGAATAATGCTTCTCAAATATATGTGCTTCTGTTTTTCAAAGCATACAAGTTCCTCTAGAAAGCAATCTCCAACAGTAATAGAAGAGCTATGCCATCAATTTTCCCTGGCCGATCTAAGAAAATCAACCAACAACTTTGATGAAAGCCTAATAATAGGAAGAGGAGGCTTTGGTGACGTATACAAAGGTTGTCTAAAACTTGATGGTTTAACTGATTATCCAGTTGCATTGAAGCGTATGTATAGAAAATCACGTCAAGGGATCACTGAGTTCAAGAATGAAATTATGTTGCTCTGCCAGCTTCGTCACCCTAATTTGGTCTCTCTTATTGGATTCTATGAAGACAAAAAGGAGACAATTATTTTGTACGACTACATGGCCAATGGATCTCTCCATGATCGTCTATACTGCAAGGATATGGAACCACTATCATGGAAGAAAAGACTAGAAATATGCATAGGAGTAGCACATGCGCTGCACTATCTTCATACAGGAGCCAAGCGCATCATCTTTCACCAAAACCTCAGTCTCCACAGCATTCTTTTGGATAACAAAATGGTGCCAAAACTCACGAGTTTCGGGCTTTCCTTACTGGGACCAGGTTTTATTGCAGGAATATCTGGTGGTGGTGACAATGCTATAAACAATAAATTCTCTGTTGAATATGACGTTTACTCCTTTGGTGTGATTCTGCTATTGGTGATATGCACAAAGGACAAGAAAACAATTTTTGACAAGATTAACAGATTGGAGAAGCAAGATTTGGGGGAGAGCCAAAGCGAAGATTCACAGAAGTTTATTGATGTCATGCCAGTAACCATGGATATATATGAGTTGGTGCATAGGTTTCCGGTTGAGGAGATAATTGATCTGATTCTCATAGGAAAGATTGCACCAGCGTGTTGGGAAGTATTTGTAAATATTGCAGAACGATGCTTGAAACAGGAACCAAATGAGCGACCAACAATGGGTGAAGTAGAGATAGAGCTTGAGCATGCTCTAAAACAGCAGGAGGAAGCCGATGCCAGCAAGACTAGTGGTGATTATATCTTATTATCCTCAACCATTTTTGATAATGAGCTATAG 1089 0.3958 MGIMLLKYMCFCFSKHTSSSRKQSPTVIEELCHQFSLADLRKSTNNFDESLIIGRGGFGDVYKGCLKLDGLTDYPVALKRMYRKSRQGITEFKNEIMLLCQLRHPNLVSLIGFYEDKKETIILYDYMANGSLHDRLYCKDMEPLSWKKRLEICIGVAHALHYLHTGAKRIIFHQNLSLHSILLDNKMVPKLTSFGLSLLGPGFIAGISGGGDNAINNKFSVEYDVYSFGVILLLVICTKDKKTIFDKINRLEKQDLGESQSEDSQKFIDVMPVTMDIYELVHRFPVEEIIDLILIGKIAPACWEVFVNIAERCLKQEPNERPTMGEVEIELEHALKQQEEADASKTSGDYILLSSTIFDNEL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00454 362 SUPERFAMILY Protein kinase-like (PK-like) 22 334 IPR011009 -
Rops8g00454 362 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Rops8g00454 362 ProSiteProfiles Protein kinase domain profile. 47 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00454 362 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
Rops8g00454 362 PANTHER OS07G0166700 PROTEIN 31 338 IPR045272 GO:0004714|GO:0006468
Rops8g00454 362 FunFam Receptor-like protein kinase ANXUR2 12 126 - -
Rops8g00454 362 Gene3D Phosphorylase Kinase; domain 1 8 126 - -
Rops8g00454 362 Pfam Protein tyrosine and serine/threonine kinase 52 197 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00454 Rops-Chr8 8610816 8614381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00454 14 342 Receptor kinase-like Gene Family AT3G51550 37.463 8.34e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00454 PK_Tyr_Ser-Thr 4.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00454 - - adu:107486597 374.785