Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00452 ATGAGAGTAAGAAAATTCTTGTGCTCCTTCGGCACACAAGAATTTCTCCATCCATCACTCTTCTATAAAGTGGCTTCTTGGGGTGATGCAATAATTAACACACTTCTCCGAATTGAAACACATTGTGCTCATTGCTCAAGTTCCATGGCTGAAGAGGTCAAGTATCAGGTGATAGAGCAGTGTCAAGTGAGTCCTCCACCTGGTTCTCTTCCTTCATCCTCCATACCTCTAAGTTATCTTGACCTCCCTTGGTTTTACTGCACCCCAATGAAGCGAATTTTCTTCTATGAGTTACCTTATTCCAAACAACACTTTCTTCAAACCGTGCTCCCCATTCTCAAACACTCTCTTTCACTCACTCTCCAACATTTCTTCCCCTTTGCCTCCAACGTCGTGTTCCCTCCAAAACCCCAAACCCCTCACATCCTTTACTCCCAAGGTGACTCTGTCTCCTTCACCGTTGTAGAATCCACAGCAGATTTCACCCACCTCGTTTCCAATTCCCCAAGAGATGTTAGAGATATGTACCCTTTTGTTCCCATGCTTCCTTCACCTCGTACCTTAGAAGATGGTACCTTGTTGATCCCAACCATGGCCATTCAGGTAACAGTTTTTGCAAACTCTGGATTCGCCATCTGCGTCTCCTTCAAACACGAGATTGCAGATGGGAGATCATTTCATCATTTCATGAAATTTTGGGCCTCAGTTTGTAGGTCAAGAGAAGTTGAAGGTTCTCTTCCACTGCCGTTGCACCAAAGAGACATCATTGGAGACCCAAAATGGCTTGAGCCCATTTTATTGGAGGAACTATGGAATTTTCCACCGGAAACCAAAGAATCCACGAACCCCGTCCATGATATACCTGATGACATGGTGCGTCATAGATTTATATTGAGCCGTCACCAAGTTGAAAAACTAAAGAAATGGGTCACTATTAAATATCAAAGTAACGGTCTGGAGACAATGCATTTATCAACCTTTGTGGTGGCTTGTGCTGTGTTTTGGGTTTCCAAGGTAAAGTTAGAATCAGAAGACGTCACTGATGATTATTGCTGCATTAGTTTTCATGTAGATTGGTGTAACCGTCCTGAGCTTTCAATTCCAGCCACATACTTTGGAAATTGTTTGACCGGTTGCTTTGCAGCCCTCCCCAAAAGGAAGCTAGTGGGAGAAAATGGTTTTTATGAGGCAGTGAATGCTCTTGGAAGCCAAGTTAGAGGTCTGAAGGGTGATCCTCTGAAAGGGGTTGAATTGTTTAAGTCAGCATCAGGTCTCCGTAAGATGAACTCGGGGAAATGGTCGCAGCGTGTGCTACAGGTCGCAGGCTCACCAAAGCTGAATGTATACGACACTGACTTTGGGTGGGGAAAGCCCAAGTTGAGTGAAATACTTCATTCAGATGATTCCAGTACAATGTTCCCTTCAGATTGTAGGGATCAAGATTGCGGCATTGAAGTTGGGCTAGTACTAAAAGCAATTCAAATGAAGAAATTCACTACCATCCTGGAAGAGCAACTTGAGAGATATTGCATTGCTGTTCCTGAATGA 1548 0.4386 MRVRKFLCSFGTQEFLHPSLFYKVASWGDAIINTLLRIETHCAHCSSSMAEEVKYQVIEQCQVSPPPGSLPSSSIPLSYLDLPWFYCTPMKRIFFYELPYSKQHFLQTVLPILKHSLSLTLQHFFPFASNVVFPPKPQTPHILYSQGDSVSFTVVESTADFTHLVSNSPRDVRDMYPFVPMLPSPRTLEDGTLLIPTMAIQVTVFANSGFAICVSFKHEIADGRSFHHFMKFWASVCRSREVEGSLPLPLHQRDIIGDPKWLEPILLEELWNFPPETKESTNPVHDIPDDMVRHRFILSRHQVEKLKKWVTIKYQSNGLETMHLSTFVVACAVFWVSKVKLESEDVTDDYCCISFHVDWCNRPELSIPATYFGNCLTGCFAALPKRKLVGENGFYEAVNALGSQVRGLKGDPLKGVELFKSASGLRKMNSGKWSQRVLQVAGSPKLNVYDTDFGWGKPKLSEILHSDDSSTMFPSDCRDQDCGIEVGLVLKAIQMKKFTTILEEQLERYCIAVPE* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00452 515 Pfam Transferase family 68 501 - -
Rops8g00452 515 PANTHER - 56 507 - -
Rops8g00452 515 Gene3D - 55 282 IPR023213 -
Rops8g00452 515 Gene3D - 287 509 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00452 Rops-Chr8 8587087 8588634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00452 93 504 Monolignol Biosynthesis Gene Families AT5G48930 22.642 3.00e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00452 - - gmx:100782335 529.25