Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00448 ATGAGGCTTCTCATATCAGCTCTATGTGTTATTGTGCTATTTTCTTATGCAGCTGCTTATGATCCTTTGGATCCCAATGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTTCAAATGTTCCGGCACATCATGAATCCAGGATGGACCTTGGGATGGTCATGGGCTAAGAAAGAAGTTATATGGACCATGGTAGGAGCTCAAACCACTGAACAAGGAGACTGCTCTAAGTTCAAAGGCAATGTGCCTCACTGTTGCAAGAAAACTCCCACAGTTGTGGACTTGCTCCCTGGTGTACCTTACAACCAGCAATACTCAAACTGCTGTAAGGGTGGAGTGGTGGGAGCATGGGGCCAAGACCCTTCAGCAGCAGTCTCAGCCTTCCAAGTGAGTGTTGGACAAGCTGGTACTTCAAACAAGACTGTTAAACTCCCCAAGAACTTCACTCTTTCGGCTCCAGGACCAGGCTATACTTGTGGTCCTGCCAAGGTTGTTCCATCTACCACTTTCCTTACAGCTGACAAGCGCCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTTGCAAGAAAGAACCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCAGATGTGCCTGTGGCTGCCAGAACAAGAAGAATTGTGTCAAGAGTGACTCCAAATTTCTCAGCATGGTGGGGATTCACACTCCAAAGAGAGACAATGAACCACTGCTCCAGTGCACTCATCATATGTGCCCAATCAGGGTACACTGGCATGTGAAGCAGAACTATAAGGACTATTGGCGAGTCAAGATTGCCGTGACAAACTTCAATTACAGGATGAATTACTCTCTCTGGTCTCTTGCTGTTCAGCATCCAAATCTTAACCATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTCCCCTATGAATCTATAAATGACACTGGTATGTTCTATGGCATGAAATTCTTTAATGATCTCTTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGAACAAGGATACATTCACATTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTCAATGGTGACGAATGCATGATGCCACCACCTGATGCCTACCCAATCCTCCCTAATTCTGCCCCTGTAAAACTACTTAACTTCCCTGCATTCATATTCTCATTGCTTGTCTTGCTAGCTGTTTGGTAA 1296 0.4506 MRLLISALCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLGWSWAKKEVIWTMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQYSNCCKGGVVGAWGQDPSAAVSAFQVSVGQAGTSNKTVKLPKNFTLSAPGPGYTCGPAKVVPSTTFLTADKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPRCACGCQNKKNCVKSDSKFLSMVGIHTPKRDNEPLLQCTHHMCPIRVHWHVKQNYKDYWRVKIAVTNFNYRMNYSLWSLAVQHPNLNHVTQVFSFDYKPLLPYESINDTGMFYGMKFFNDLLMEAGPSGNVQSEVLLQKNKDTFTFKQGWAFPRKVYFNGDECMMPPPDAYPILPNSAPVKLLNFPAFIFSLLVLLAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00448 431 PANTHER PROTEIN COBRA 8 423 IPR006918 GO:0010215|GO:0016020
Rops8g00448 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Rops8g00448 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00448 Rops-Chr8 8506598 8509162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00448 1 430 COBRA Gene Family AT3G29810 65.158 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00448 - - gmx:100783410 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00448 8 8506598 8509162 Rops5g01519 5 31450537 31453008 PCT