Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00446 ATGGCTATCTTCATGGCAATTCTTGGTGTGGTCTTGGTGCTCTGTTTTTGCTCTGCTTTGTTGAGGTGGAATGAATTAAGGTACATGAGGAAAGGTTTGCCTCTAGGCACAATGGGGTGGCCTGTTTTTGGAGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATTCTGATGAATGAAGCAAAAGGGTTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTTCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGAGTGATTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCATTTCTCTCATCACTGAAGCAGATTGCTGGTATGGAATCTAGCTCAATTTCTCAACCATTCATGTCAGAGTTCTTTAAGCTAGTGTTAGGAACTCTCTCCTTGCCAATTGACCTTCCTGGTACTAATTATCGCCATGGATCGCAGGCAAGGAAGAGAATTATCAGCATTCTGAGTAAGCTGCTAGAAGAAAGGAGAGAATCCCATGATACTCATGTAGACATGCTTGGTTGCTTGATGCGAAGAGATGATAATAGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCCACTACATCAATGATGGCTGTGAAGTACCTCCATGACCATCCCAAAGTTCTTGACGAAATCAGAAAAGAGCATTTTGCCATAAGAGAAAGGAAAAGGCCAGAGGATCCAATTAACTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTAATTTTTGAGACCTCGAGATTAGCCACAATAGTTAATGGGGTTCTGAGAAAAACAACCCATGACATGGAACTAAACGGCTATTTGATTCCTAAAGGGTGGAGGATATATGTATATACAAGAGAGATAAATTATGACCCATTTCTGTATCATGATCCACTAACTTTCAACCCATGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGCACTAGACAATGTCCAGGAAAGGAGTTGGGAATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTAGGAGGAGAGAAACTAATGAAATTTCCTAGAGTTGTGGCCCCAAATGGACTTCACATAAGGGTCTCATCTTATTAA 1392 0.4037 MAIFMAILGVVLVLCFCSALLRWNELRYMRKGLPLGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGFVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLSDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSISQPFMSEFFKLVLGTLSLPIDLPGTNYRHGSQARKRIISILSKLLEERRESHDTHVDMLGCLMRRDDNRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLDEIRKEHFAIRERKRPEDPINCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGEKLMKFPRVVAPNGLHIRVSSY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00446 463 Gene3D Cytochrome P450 25 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 Pfam Cytochrome P450 35 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PANTHER CYTOCHROME P450 26 31 441 - -
Rops8g00446 463 CDD CYP90-like 60 461 - -
Rops8g00446 463 FunFam Cytochrome P450 85A1 24 462 - -
Rops8g00446 463 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 SUPERFAMILY Cytochrome P450 26 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00446 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00446 Rops-Chr8 8475471 8479221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00446 81 463 Cytochrome P450 AT5G38970 69.531 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00446 K09590 - gmx:100785414 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00446 8 8475471 8479221 Rops8g00446 8 8475471 8479221 ECH
Rops5g01523 5 31535180 31538983 Rops8g00446 8 8475471 8479221 PCT