LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g00446	ATGGCTATCTTCATGGCAATTCTTGGTGTGGTCTTGGTGCTCTGTTTTTGCTCTGCTTTGTTGAGGTGGAATGAATTAAGGTACATGAGGAAAGGTTTGCCTCTAGGCACAATGGGGTGGCCTGTTTTTGGAGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAACCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGGTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATACATTCTGATGAATGAAGCAAAAGGGTTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTTCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGAGTGATTGGGATAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCATTTCTCTCATCACTGAAGCAGATTGCTGGTATGGAATCTAGCTCAATTTCTCAACCATTCATGTCAGAGTTCTTTAAGCTAGTGTTAGGAACTCTCTCCTTGCCAATTGACCTTCCTGGTACTAATTATCGCCATGGATCGCAGGCAAGGAAGAGAATTATCAGCATTCTGAGTAAGCTGCTAGAAGAAAGGAGAGAATCCCATGATACTCATGTAGACATGCTTGGTTGCTTGATGCGAAGAGATGATAATAGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCCACTACATCAATGATGGCTGTGAAGTACCTCCATGACCATCCCAAAGTTCTTGACGAAATCAGAAAAGAGCATTTTGCCATAAGAGAAAGGAAAAGGCCAGAGGATCCAATTAACTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTAATTTTTGAGACCTCGAGATTAGCCACAATAGTTAATGGGGTTCTGAGAAAAACAACCCATGACATGGAACTAAACGGCTATTTGATTCCTAAAGGGTGGAGGATATATGTATATACAAGAGAGATAAATTATGACCCATTTCTGTATCATGATCCACTAACTTTCAACCCATGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGCACTAGACAATGTCCAGGAAAGGAGTTGGGAATAGCAGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGATGGGAAGAAGTAGGAGGAGAGAAACTAATGAAATTTCCTAGAGTTGTGGCCCCAAATGGACTTCACATAAGGGTCTCATCTTATTAA	1392	0.4037	MAIFMAILGVVLVLCFCSALLRWNELRYMRKGLPLGTMGWPVFGETTEFLKQGPNFMKNQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGFVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLSDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSISQPFMSEFFKLVLGTLSLPIDLPGTNYRHGSQARKRIISILSKLLEERRESHDTHVDMLGCLMRRDDNRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLDEIRKEHFAIRERKRPEDPINCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGEKLMKFPRVVAPNGLHIRVSSY*	464

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Rops8g00446	463	Gene3D	Cytochrome P450	25	461	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	Pfam	Cytochrome P450	35	449	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	PANTHER	CYTOCHROME P450 26	31	441	-	-
Rops8g00446	463	CDD	CYP90-like	60	461	-	-
Rops8g00446	463	FunFam	Cytochrome P450 85A1	24	462	-	-
Rops8g00446	463	PRINTS	E-class P450 group I signature	403	413	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	PRINTS	E-class P450 group I signature	370	394	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	PRINTS	E-class P450 group I signature	330	348	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	PRINTS	E-class P450 group I signature	264	281	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Rops8g00446	463	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g00446	Rops-Chr8	8475471	8479221	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g00446	81	463	Cytochrome P450	AT5G38970	69.531	0.0	570

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g00446	K09590		-	gmx:100785414	870.922

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops8g00446	8	8475471	8479221	Rops8g00446	8	8475471	8479221	ECH
	Rops5g01523	5	31535180	31538983	Rops8g00446	8	8475471	8479221	PCT

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