Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00429 ATGCTTGTTTCAAAAGTGAAGCTCTTGGCCGCAAGAGATGCTTATGATGCTACAGGGAAGAATGGTTACAACGATTACCTCATCGAAGAAGAAGAGGGTATCAACGACCACAACGTTGTTCTCAAATGTGTTGAGATCCAAAACGCCACTTCCGAAGGAGCAACCTCTTTCCTCTTCACTGAGTACCAGTACGTGGGAATCTTCATGGTGGCTTTTGCCGTTTTGATATTCCTTCTCCTTGGCTCCGTGGAAGGATTCAGCACAAGCTACCAACCTTGCGCCTATGATCTAACTAAGATGTGTGAGCCAGCTTTTGCCATTGCTATTTTCAGCACCATATCTTTTCTGCTGGGTGGCATCACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTACAACCTATGCCAATGCAAGGACAACCTTGGAAGTAAGAAAGGGAGTTGGAAAGGCTTTTATTACTGCATTCGGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTGCCGTCAATCTCTTCGAGCTTTATCATGGCTCTCCAGAGAAAGTCCAGAGCTCCCAGCGGGTTTCCACGAGTGAGGTAAGGAGAGAACCCTGTCACATGATGGAGTTTGATATGTGA 645 0.4558 MLVSKVKLLAARDAYDATGKNGYNDYLIEEEEGINDHNVVLKCVEIQNATSEGATSFLFTEYQYVGIFMVAFAVLIFLLLGSVEGFSTSYQPCAYDLTKMCEPAFAIAIFSTISFLLGGITSVISGFLGMKITTYANARTTLEVRKGVGKAFITAFGSGAVMGFLLAANGLLVLYIAVNLFELYHGSPEKVQSSQRVSTSEVRREPCHMMEFDM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00429 214 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 2 187 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops8g00429 214 Pfam Inorganic H+ pyrophosphatase 42 184 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00429 Rops-Chr8 7981348 7981992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00429 2 186 Primary Pumps ATPases AT1G15690 69.312 5.58e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00429 K23025 - gmx:100775864 318.161