Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00416 ATGGTTGAGCTTCAGAAGTTTGGAGGAGATACTCTGGAATTTCACGAGTTCTATAGGAATCTATCTAATGGGCTGAAAGATATCATTTGGAAAGCAGAGCCTATCGACGAAGAAATAGATGCTAAGAGCAACTATAACTTTGAGAAGCCTTTCTTGTACCTTGCCAGGAAACTTGCAAGTGATCCTAACTTGCACTTTGTAGAAGCTCCTGCATTGGCTACTCCAGAAGTTCAAATTGATTTAGATGCACAACAACAGCATGAGGCTGAGCTTGCTGCAGCTTCTAGTCAGCCCCTTCCTAACGATGATGATGATGCATTTGAGTCGAACTTGTGTAACTGTCGACCATTTTTTTGA 357 0.4174 MVELQKFGGDTLEFHEFYRNLSNGLKDIIWKAEPIDEEIDAKSNYNFEKPFLYLARKLASDPNLHFVEAPALATPEVQIDLDAQQQHEAELAAASSQPLPNDDDDAFESNLCNCRPFF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00416 118 SMART ran_sub_2 2 107 - -
Rops8g00416 118 Gene3D Kinase associated domain 1, KA1 1 31 - -
Rops8g00416 118 PANTHER RAN GTPASE 38 106 IPR002041 GO:0003924|GO:0005525|GO:0006913
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00416 Rops-Chr8 7716693 7718242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00416 1 38 CBL-interacting serine-threonine protein kinases AT1G30270 71.053 1.70e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00416 K07936 - cit:102612964 124.79