Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00407 ATGGAAGACTTAGTGTCAAAAAGGATGCGCTATGCCAAACCGGCTCTTCTATCTGGATACTCTGCAGGAGGCTTAGCATCTATACTGCATTGTGATGAATTTTGGGAATTGTTTCCTATAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGTTGTTGATGTATTTGGCCGTCACAGTTTAAGGAATATATTCAAAGGTGTGGTCACCTTACAGTGA 231 0.4026 MEDLVSKRMRYAKPALLSGYSAGGLASILHCDEFWELFPITTRVKCLSDAGLFLDVVDVFGRHSLRNIFKGVVTLQ* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00407 76 Pfam Pectinacetylesterase 1 76 IPR004963 GO:0016787
Rops8g00407 76 PANTHER NOTUM-RELATED 1 76 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00407 Rops-Chr8 7530554 7530784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00407 1 76 Carbohydrate Esterase AT2G46930 72.368 6.77e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00407 K19882 - gmx:100791571 123.635