Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00400 ATGGCTTTCCTCCTCCATCACCGTCTTCCGATCATCGCCGTGATCCTCCTCGTTTCCCTCTCCGCCACGGCGACGGCACGCCCTTGCCGGAGCTTCATAATCTCATCTTACTCGTTCCGTAACCCTTCATCCACCGTTCTGAGGAGGGACATCCCATGGGAGACCTACATGTCCACCAAGCTTATCTCAGGAACAAGCCTTCAACTCTTAAGGCGTTTCAATCACCGATCAGAAAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCTGCTTATGTTTCTGTGTTTGTTCGTGTTTTGCGTGATATTTTCAAAGAAGACACTGTTGAGTATGTTTTGGCACTGATTGATGAAATGGTTACAGGGAACTTTCAACATTATAAGTGGATGTTGAGGCTTACAGGTGGATGTTGCACAGAGAAAATATGCAAAGTCTGTAACAAGTCCAGATGGAAACTGAGGACAAAAGAAAATGATGTTGAGGCATCTAATGACAACAAAAGTAGAAATAAGGTGCCTCCAAAAGTGCTTCGTTACTTACCACTAAAACCACGTTTGCAAAGATTATTTTTTTCTTCAAAGACTGCTGAATTTAGATGGCATGCTATGAATAATAACAATGATGACATGATGAGGCATCCTAGAGATTCTGAAGCACGGAAGAGGTTTGATTCAACTCATACTCTATTTGCATCAGATCCTCAAAATGTGCGTCTTGCATTAGCTACTGATGGTTTCAATCCTTTTGGTAGTATGAATGTTGATCTAGGCTCCCCAATGGAAGCAAGACCTTCTTCTGCAGCTAGTCATGAACCTCATCATATTGGACCATCCAATTCTCATATTAGTTCTTAG 855 0.4281 MAFLLHHRLPIIAVILLVSLSATATARPCRSFIISSYSFRNPSSTVLRRDIPWETYMSTKLISGTSLQLLRRFNHRSESHRAQLLDDDGPAYVSVFVRVLRDIFKEDTVEYVLALIDEMVTGNFQHYKWMLRLTGGCCTEKICKVCNKSRWKLRTKENDVEASNDNKSRNKVPPKVLRYLPLKPRLQRLFFSSKTAEFRWHAMNNNNDDMMRHPRDSEARKRFDSTHTLFASDPQNVRLALATDGFNPFGSMNVDLGSPMEARPSSAASHEPHHIGPSNSHISS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00400 284 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 43 157 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops8g00400 284 SUPERFAMILY ARM repeat 34 137 IPR016024 -
Rops8g00400 284 Gene3D - 27 240 IPR011989 -
Rops8g00400 284 MobiDBLite consensus disorder prediction 257 284 - -
Rops8g00400 284 Pfam V-ATPase subunit H 45 133 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops8g00400 284 Pfam Transposase family tnp2 208 254 IPR004242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00400 Rops-Chr8 7457960 7465253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00400 46 123 Primary Pumps ATPases(2) AT3G42050 71.795 7.97e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00400 - K02144 tpra:123904930 164.081