Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00399 ATGGTTCTGCTGTGTTCCACATCTTCCTTCAACTGGTGTAGCGGTATATTCTCGGAGACTCCACAGAACAGTTTGGTGATTTTGAAAGCTAGACTGAAGGGTCTTAAATGTATGAACAAAGCTGCAAGGGATCTCCTACGGCGGCTCCAGAAGATTGATGGTGACAACTATCCTGAGGTACTAGCTTTCCTTTTTGATCACTTTGGACTGAGACTTCTTTGGGCTTACCTTACAGAGACAGATGGGATTGAAGATCTGCCTCAAAATGCAATGATCGGAAGTGAATGGGAAAGAAGTTTAGATGCAAATTACTGGTTTTATGGAAAAGAATGCTGGAAAGTTCATGAAAGAGCTTTGGACACCACTTATCAGTGCCCAGAAAAAGGCCAGCAGTATTCCTTAGTAGCTTTTGGATGCAATAGAAGAAGAAATCAGGAAGATGAAGTACTCACCAACATTTCTTTCCTCTTTTCTCTATATTTCAAGCTCTTGGAGAGTCATATAAAAAATGAGATGATGGAGAAGAGTCAACTAATTCATGCACAACTCAACAACGAGGGAAACAAACAGAACATCTCTGAACCTCGCAGATCTGCTTCAATTGCTTGTGGAGCAAACATATTCAAAATTTGCATGAAGCTTCCTCGATGGGCTTTGCAGTTTCTTACTAGGGGAATTCCAGAAGTGTTATCTGCAGTAACTACATTGCAAACTATTTGCTGCCATCTTTGA 732 0.4085 MVLLCSTSSFNWCSGIFSETPQNSLVILKARLKGLKCMNKAARDLLRRLQKIDGDNYPEVLAFLFDHFGLRLLWAYLTETDGIEDLPQNAMIGSEWERSLDANYWFYGKECWKVHERALDTTYQCPEKGQQYSLVAFGCNRRRNQEDEVLTNISFLFSLYFKLLESHIKNEMMEKSQLIHAQLNNEGNKQNISEPRRSASIACGANIFKICMKLPRWALQFLTRGIPEVLSAVTTLQTICCHL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00399 243 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 162 228 IPR042293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00399 Rops-Chr8 7366322 7372149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00399 162 229 ARID Transcription Factor Family AT3G43240 54.412 8.22e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00399 - - gmx:100820590 115.546