Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00342 ATGAAGTTGATTGGCCTCCAACCTCAAAAGAAATTTCAGCTTTTTGTTTCTTCATTGGGTTTGGTGTATGTGGTTCTAGATTTCCTACCTTTAAATTCTGCCTCAGAATCTTTAAGGATTCTGCTTTCAACTGGGTCTTGTTTGAAAGTTTGTATTTGCTTGAATTGGGCTATTTTTATTTATCAGGATTGTTGTTGGGCTGAGAAGAAGAAATCATCAAGAAAGAACAAAGCAGTTGTTAATGAGAATGCACCCTTGTTGCCTAAAAGTCAGGCCCATGAGAGTGATTCTGGTTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTAGCCACCACAATTATTGGTGCTGGGATAATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGGTGCCTGGCCTTCTTGCAATTCTCTTCATGGCTTTGTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCAGGGCAGGAAAGTCTGTTTCTTATGCTAGTCTCATGGGGGATTCCTTTGGAAAATATGGAAAAGCTTTGGTGCAGATCTGTGTTATAGTCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATCGGTGATGTGCTCTCTGGAACATCTTCAAGTGAAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACGGGAAGAACATTTATTGTCCTTCTTACAACACTTACTATATTTGCACCCCTTGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACGTCCGCCCTTTCAGTTGCACTAGCAGTTGTCTTTCTTGTTATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTAGCATGCCCAGACTCTTCCCGGTCGTTACTGATGTGCCATCAATCTTTAAACTATTCACCGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCTTCACAGATGCAAGGGGTTGTACGTTCTGCCCTAGGTCTATGCTCTTCAGTGTACTTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGAGAAGGAACTCTTGATGATGTGCTTGCCAATTTCGATACCGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCTGCACACCTCATGCTTGTGTTTCCAGTTGTCTTCTATCCATTGCGGCTCAATATCGATGGTCTCCTCTTCCCTTCATCAAGGCCTTTGGTTCTGCATAACTTCAGATTTGCATCAATCACCATTGCCCTTATTGGTGTTATCTTCCTTGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATATTTCCAGCTGCCATCACTCTAAGGGACCGCTACAACATAGCAACTAAATCAGACAAGATTCTGTCTGTCATTATGATAGTCCTGGCAGTCTTCTCAAACATTGTGGCTATATACAGTGATGCCTATTCTTTGATTAAGCAGAATAAAACTTCAAGGGAGTGA 1572 0.4154 MKLIGLQPQKKFQLFVSSLGLVYVVLDFLPLNSASESLRILLSTGSCLKVCICLNWAIFIYQDCCWAEKKKSSRKNKAVVNENAPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGMVPGLLAILFMALLTEKSIELLIRFTRAGKSVSYASLMGDSFGKYGKALVQICVIVNNIGVLIVYMIIIGDVLSGTSSSEDHHYGILEGWFGVHWWTGRTFIVLLTTLTIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGISMPRLFPVVTDVPSIFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVRSALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFPSSRPLVLHNFRFASITIALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVIMIVLAVFSNIVAIYSDAYSLIKQNKTSRE* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00342 523 Pfam Transmembrane amino acid transporter protein 105 509 IPR013057 -
Rops8g00342 523 PANTHER AMINO ACID TRANSPORTER 101 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00342 Rops-Chr8 6544789 6548957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00342 74 523 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.690 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00342 K14207 - gmx:100796345 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00342 8 6544789 6548957 Rops8g00342 8 6544789 6548957 ECH