Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00341 ATGTCTGGACCGATCGATCCCATTAGCAAGGTTTGTACGGGGCGTGAGGCTTGGAGATTGAAGGTCAGGATCGTTAGGCTTTGGTGTGTTCCAATGTTTGGTAACACATCCCAGATAAATTCCATCCAGATGGTTTTCATGGATGAACATGGAGAAAGGATTCAAGCTTCAGTGAAGAATACACTGTTGTACAAGTTCAAGCATTTTCTCCATGAGGGATCTGTCTTTATCTTCACTCATTTCATTGTTATTCCCAATGTTGGGATGTACAGGGCAACTTCACATTCCTTTCGATTGCTTTTTACATTTAAGACTAAGTACACTGTGGCTGAGTCTTCTATTATTCCTTTGCTTGGCTTACGTTTGGTTCCGTTTGATGATGTGCTTAAAAATGATCATGACTCTGATTATTTAATTGACGTTATTGGTGTGTTGACTTCTGTTTCCTCGGAGAAAGACATTGAAAAGGATGGGAAATTGTCCAAGATGATTGTTATAGAGTTGACGTCAGATAAGGGTAAATTGGAATGTGCTCTGTTCGGTGATTATGTTGGGACCTTGATGGATTTTGTTGCTGTGGGTGTCAATGAGCATCCAAGGGTGATTATTCAATTTGCGAAAGTGAAGTTGTTTAGAGGCAAGATAGTGCTTCAGAATGTCATGCATGCAACTCGGCTGCTGTTTAATCCTGATGTTGCAGAAGCTGTCGATTTTAGGAATGGGATTGCTGAACATGGATTGATGATATTCCTCTTCTATCTGGGACTGATTCATTTAGTTTGTCTGTTGAGGATGAGTTTATGA 804 0.403 MSGPIDPISKVCTGREAWRLKVRIVRLWCVPMFGNTSQINSIQMVFMDEHGERIQASVKNTLLYKFKHFLHEGSVFIFTHFIVIPNVGMYRATSHSFRLLFTFKTKYTVAESSIIPLLGLRLVPFDDVLKNDHDSDYLIDVIGVLTSVSSEKDIEKDGKLSKMIVIELTSDKGKLECALFGDYVGTLMDFVAVGVNEHPRVIIQFAKVKLFRGKIVLQNVMHATRLLFNPDVAEAVDFRNGIAEHGLMIFLFYLGLIHLVCLLRMSL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00341 267 CDD RPA1_DBD_A_like 19 106 - -
Rops8g00341 267 Gene3D - 4 108 IPR012340 -
Rops8g00341 267 CDD RPA1_DBD_B_like 140 239 - -
Rops8g00341 267 Gene3D - 115 248 IPR012340 -
Rops8g00341 267 Pfam Domain of unknown function DUF223 44 138 IPR003871 -
Rops8g00341 267 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
Rops8g00341 267 SUPERFAMILY Nucleic acid-binding proteins 121 246 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00341 Rops-Chr8 6527200 6528467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00341 7 239 Core DNA Replication Machinery Family AT2G06510 23.554 1.39e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00341 - - adu:110276578 251.521