Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00317 ATGGCTTCAACTACCCCTTCTCCTAATGCTTCTCCTTCTGCAGTGCCTCCAACAGCATCTGCTTCACCACCTCCTCCTTCATCTTCCACCCCACCATCACCTCTCACTTCTTCTCAACCCAATCAAACATCCAATTCCCCTGCTCCTTCATCACCTTCTAACCCTTCAGCTCCACCTCCTTCTCCTACACAAGCAGTGCCTGTAACCCCTCCTCCTTCACCACCCCTTTCTCCTCCACCATCATCTACACCACCACCAACTTCACCCCCTCCTTCACCACCAGATTCTCCACCACCATTACCACCAGCATCCCCAACACCACCTATTGCAACATCACCTCCACCAGCAGCTACCACTGTCCCTCCTCCAGCTGTGACTTCACCTTCCCTTCCAACTGTGTCCCCACCACCTCCAGCAGCTGGTTCCCCTCCTCCTCAACCCTCAGAGGCACCTCCCAGAGCAATTCCACCTCCCTCTCAACCGGTTTCGCCATCTCCTCCTCCTCCAGCCAATGTGCCAAAGCCACCATCCACCAATTCTCCTCCTCCTCCAGCCAATGTGCCGAAGCCACCATCCACCAATTCTCCTCCTCCACAGCAGGAAAAGCCACCTCCTTTACAGGCATCCCCTCCATCAGTTTCTCAATCTCCTCCTTCTCCTTCCAATGATGTTCCCCCTCCATCCACATTGCCATCAACTCCTCCTTCCACTGATGTTCCACCTCCATCCTCATTGCCATCAAATCCTTCAGTCCCTTCAGGCTCTTCACCTCCAGATTCTTTGCCTGGTCCCCCTACTAATAAAACAGCATCTAGGGGTCCAACTGTGTCGTTACCCTCTATTCCAACTGAGAAACCCACTGCTAGAACAACTAATGGTGGTGACACTGGTGATATAGCCACAAACACCACACCTTCACATTCAGGAGGGTTAAATACCGGAGGAGCTGTAGCTATTGGCGTCGTAGTTAGTTGTATTGTCCTCAGTCTTCTTGTTATGGCTGTATGGTTTGTACAGAAGAAAAAGAAGAAGCAAACAGGACCGAGAGGTGGTTATGCTATACCTTCTCCATTTTCCTCATCTCACAATTCAGGTACCTTGTTTTTGAGACCACAGTCTCCAGCCAACTTTATAGGTAGTGGTTCTGGTAGCGAAGTTGCGTATTCACCATCAGAGCCAGGTGGAGTAAGTGGTTCAAGATCATGGTTCACATATGAAGAACTTACCCAAGCTACAAATGGGTTTTCAGCTCAAAATCTGTTGGGAGAAGGTGGATTTGGTTGTGTATACAAAGGTTTGCTCATAGATGGAAGACAAGTGGCTGTGAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAACGTGAGTTCAGGGCAGAAGTTGAGATCATTAGCCGAGTACATCATCGTCATCTGGTTTCTTTGGTTGGTTATTGTATATCTGAGCATCAAAGATTGCTTGTCTACGACTATGTTCCCAACAATACACTTGATTACCATCTACATGGTGAAAACAGACCGGTTCTGGATTGGCCTACCAGGGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTTCTTGATCACAACTTTGAAGCTCAAGTTTCAGACTTTGGGCTTGCAAAATTAGCATTGGATTCAAATACACATGTAACTACACGTGTAATGGGAACCTTTGGGTATATGGCACCAGAATATGCCACGAGTGGGAAATTGACTGAAAAGTCTGATGTATATTCCTTTGGGGTTGTGCTTTTGGAGCTGATTACAGGTCGAAAGCCTGTAGATGTCTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCACTGTTGACTGAAGCACTTGATAATGAGGACTTTGACATTTTGGTGGATCCAAGACTGGGAAAGAACTATAATAGAAATGAAATGTTTAGGATGATTGAGGCTGCTGCAGCCTGCGTGCGTCACTCTTCAGTTAAGAGGCCACGGATGAGTCAGGTAGTGAGAGCTTTAGATTCCTTAGATGAGTTTTCAGATCTCAATAATGGAATGAGGCCGGGGCAGAGTTCAGTATTTGATTCTGCACAGCAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGCAGCCAAGATAGTTCCAGTTTCTTTAATGAGTCTCAAAGTAGCTGGAGGAGTAGAGATCAAGAATCTTCAACTATGTTCCCCCAAAATAAATCTGGGTCTTGGAACGTTTGA 2292 0.4734 MASTTPSPNASPSAVPPTASASPPPPSSSTPPSPLTSSQPNQTSNSPAPSSPSNPSAPPPSPTQAVPVTPPPSPPLSPPPSSTPPPTSPPPSPPDSPPPLPPASPTPPIATSPPPAATTVPPPAVTSPSLPTVSPPPPAAGSPPPQPSEAPPRAIPPPSQPVSPSPPPPANVPKPPSTNSPPPPANVPKPPSTNSPPPQQEKPPPLQASPPSVSQSPPSPSNDVPPPSTLPSTPPSTDVPPPSSLPSNPSVPSGSSPPDSLPGPPTNKTASRGPTVSLPSIPTEKPTARTTNGGDTGDIATNTTPSHSGGLNTGGAVAIGVVVSCIVLSLLVMAVWFVQKKKKKQTGPRGGYAIPSPFSSSHNSGTLFLRPQSPANFIGSGSGSEVAYSPSEPGGVSGSRSWFTYEELTQATNGFSAQNLLGEGGFGCVYKGLLIDGRQVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLDYHLHGENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEAQVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPIGDESLVEWARPLLTEALDNEDFDILVDPRLGKNYNRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFSDLNNGMRPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFFNESQSSWRSRDQESSTMFPQNKSGSWNV* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00317 763 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 326 736 IPR047117 -
Rops8g00317 763 ProSiteProfiles Protein kinase domain profile. 415 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00317 763 Pfam Protein tyrosine and serine/threonine kinase 418 688 IPR001245 GO:0004672|GO:0006468
Rops8g00317 763 FunFam proline-rich receptor-like protein kinase PERK8 491 703 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 34 50 - -
Rops8g00317 763 SUPERFAMILY Protein kinase-like (PK-like) 394 688 IPR011009 -
Rops8g00317 763 Gene3D Phosphorylase Kinase; domain 1 392 490 - -
Rops8g00317 763 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 265 311 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 10 33 - -
Rops8g00317 763 SMART serkin_6 415 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00317 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Rops8g00317 763 CDD STKc_IRAK 421 691 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 737 763 - -
Rops8g00317 763 ProSitePatterns Protein kinases ATP-binding region signature. 421 443 IPR017441 GO:0005524
Rops8g00317 763 FunFam Proline-rich receptor-like protein kinase PERK8 387 490 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 51 264 - -
Rops8g00317 763 MobiDBLite consensus disorder prediction 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00317 Rops-Chr8 6157525 6164845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00317 310 684 Trihelix Transcription Factor Family AT1G68690 67.200 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Rops8g00317 PK_Tyr_Ser-Thr 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00317 - - gmx:100784873 900.582