Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00301 ATGAGCTTGAGGGCTTACGTTCGAGAACCTGATGGGTTCTCATTGGTTTATGATTATGTATCCACTGGGAGTCTTGCTGATGTAATGGATAGAGTGAGGGGAAATGAGTTGCAGCTTGGTTGGGAAATTAGGCTAAGGATTGCTGTTGGTGTGGTTAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCAAGAAATGTGATGTTGGATGCAGAGTTTGAACCCAGATTGGCTGATTATGGATTGGCTAAACTTCTACCAAACTTGGATAGAGGGACTTCTGTCAACAGCCCTCCTGAATGTTTCCATAATAGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATAATACTAGGTGTTTTATTAACGGGTAAGGACCCTTCAGATTCATTCTTTGGAGAAGCATCCAGTCGAGGAAGCTTGGGAAGTTGGCTGAGGCACTTGCAGCAAGCAGGTGAGGCAAAGGAAGCTCTAGATAAGAGTATTTTAGGGGAAGAAGGTGAAGAAGATGAGATGCTAATGGCTGTGAGAATTGCTGCTGCATGCTTATCTGATATGCCTGCTGATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 657 0.4399 MSLRAYVREPDGFSLVYDYVSTGSLADVMDRVRGNELQLGWEIRLRIAVGVVKGLQYLHFTCVPQILHYNLKPRNVMLDAEFEPRLADYGLAKLLPNLDRGTSVNSPPECFHNSSRYTDKSDIFSFGIILGVLLTGKDPSDSFFGEASSRGSLGSWLRHLQQAGEAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00301 218 SUPERFAMILY Protein kinase-like (PK-like) 3 212 IPR011009 -
Rops8g00301 218 Gene3D Transferase(Phosphotransferase) domain 1 20 217 - -
Rops8g00301 218 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 20 217 - -
Rops8g00301 218 Pfam Protein kinase domain 3 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00301 218 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 214 - -
Rops8g00301 218 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00301 Rops-Chr8 5870274 5872913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00301 1 215 Receptor kinase-like Gene Family AT2G31880 38.565 4.77e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Rops8g00301 Pkinase 7.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00301 - - gmx:102664273 389.423