Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00297 ATGACCATGGTTCCTTCTCAAAGCGGCAAACAAAATAGAATTACTGATTATGTTATCTACAGCAACACAACAAGTGCTATGAACCAAGTTGAAGTTGAAGGTTACAATTGTTTAGGATCTGAATTTGTGGTAAGGCACATGGCTGAGGAAGAAGAATCATCAAGAGCCAACACTAGTACTACTAATAATCATAACCAACCTGGTTCCACCTCAAAGGAAGAAGAAGAAGAAAGAGGAAACAACAACAACAATAATAGTAACTGGCTTCAATTAAGCATAGGTTTTCATCAGAGTCAATCAACGGCGACAACCACCAAGCACGACCGTGATCACCACCGACTTGTGGAGCTTGAGTTGCTACCTTCTGGACGCCATTCCAATTCACGGCCAAACTTGGAGCCACCGGCTATTTTTCCGGCGAGGGGTTGTCAAGGAGGGTCTACTTTTGGTGCTTCTCTGCTTTTTGAACAAACTACATCGTCAATGTCAATGCCTTGTGGTCCTTCTCATCAACATAGAGAGATGATGAACTGGGCATTTGGTCCACTATTACCTCATTCCATGGCTTTTATGCCTTCTTCTTCTTTCACTCCCTCTTCTTCTTCCCCTTCATCACACTCTTGTTCTTCTTTGAGGCCTTCTTTAGGATCTGTGCCTTTTCACTTTCCTTCTTCTTCTGGGTTTGATCAATTTGATGCTGCTGGACCAAGTTCTGATGTCACTGTTCGAGTTGTTGATCCTCCTCCAAGACCTCATTCTGGAATATGGTTTATGTTACAAGCCTCACAAAACCAAGCTAAAGAACCATTCTTGCCACAAATACCTAAGAACTACCTTAGAATCAAAGATGGGAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAAACTTGAGAACGAATCAGAGATAGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGACTACAAGGGACACTTCTACAAGGGCTTTGCTTGCAGATTCCTCAACTACAGATCATGTCATGGTGCTCCATTATGGTAGAAGCACTGCTTAA 1083 0.4257 MTMVPSQSGKQNRITDYVIYSNTTSAMNQVEVEGYNCLGSEFVVRHMAEEEESSRANTSTTNNHNQPGSTSKEEEEERGNNNNNNSNWLQLSIGFHQSQSTATTTKHDRDHHRLVELELLPSGRHSNSRPNLEPPAIFPARGCQGGSTFGASLLFEQTTSSMSMPCGPSHQHREMMNWAFGPLLPHSMAFMPSSSFTPSSSSPSSHSCSSLRPSLGSVPFHFPSSSGFDQFDAAGPSSDVTVRVVDPPPRPHSGIWFMLQASQNQAKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLENESEIEITCRGQQLLPFLTLQHVRDNIWTTRDTSTRALLADSSTTDHVMVLHYGRSTA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00297 360 Gene3D - 249 355 - -
Rops8g00297 360 MobiDBLite consensus disorder prediction 49 88 - -
Rops8g00297 360 PANTHER RING FINGER PROTEIN 1 358 IPR044171 GO:0007275
Rops8g00297 360 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00297 Rops-Chr8 5802899 5812105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00297 268 356 C3H Transcription Factor Family AT3G23060 35.870 2.99e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00297 - - lja:Lj1g3v3138970.1 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00297 8 5802899 5812105 Rops8g00297 8 5802899 5812105 ECH