Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00290 ATGAAAACCATTGAAGTTTTCAGAGTAGCACCGACTTTGGTCTCAGAAGAGTTACCTACTCAAACATTGCTTCCTCTCACCTCCTTTGACATACTATGGTTAAGGTTACCTCCTGTTCAACGTCTTTTCTTCTATGAATTCCCTCACCCAACCCCACTCTTCTTTGATACCCTTCTTCCCAAACTCAAATGTTCCCTTTCTCTTGCACTTGGTTACTTCTACCCTCTTGCTGGCCACCTTACTTGGCCCCTTGAATCCAACAAACCCATCATCAATTACACCAAAGCTACAAAAAGTCACCATCTTTTACCACAGTTGACCATATCCCATGATCAAGCTACTGTATTGGCTCTCCAGGTCACTCTATTTCCAAATTATGGATTTTCCATTGGTGTTGCCTCACACCATGCTGTTCTAGATGGCAAAACTTCAACATCTTTTATCAAATCATGGGCTTATCTTTGTAGAGAATCAACCTCTTCTTTGCCACCTGAATTGAGTCCTTTCTATAACAGGGAAGTAATCAAAGACCCCAATGAGTTAGAGGCAAAATATGTGAGTGACTGGTTAAAACATGGTGGACCCAACAACAGAAGCCTCAAGGTTTGGGATCTCCAAGTCCCAGAAGAGTCAACTAGAGGGTTATTTCACTTGTCTCGCTCAGATATTGAAAAGCTCAAACAATTTGTAGTCTCCAAACAAAAAGGAAAGAACCTTCACTTGTCAACTTTTGTTCTATCTGTTGCCTATGGATTGGTTTGCAGAGTGAAAGCAGAGGAAATTAAAACCAAGAAAATTCTTTTGGCTTTGAGTATTGATTGCAGGAATCGGTTAGAGCCTCCAGTTCCTCCAACATATTTTGGAAATTGTGTTGGTGGCAGACTTGTAATTGTGGAAACAAGAGAATTATTGGGAGAAGATGGACTAATTGTGGCTGTGGAAGCACTGAGTGAAGCCTTGGAAACTTTGAAGGATGGAGTACTGAGTGGAGCAGAAGATTGGTCATCATGGTTGCTTGATGGTCTTTTCACTGATGTGAAGACAATTGGCACTGCTGGGTCTCCAAGGTTTGAGGTTTACAACAATGATTTTGGTTGGGGAAGACCAAAGAAGGTGGACATGGCATCGATAGATAGAACTGGGGCATTATGTCTTTCAGACAGCAAAAATGGTGATGGAGTTGAAGTAAGTTTTGTGTCCAATAAAGTAGCAATGGAGACATTTTCTTCTCTCTTTGTCAAAGGCCTTGCAACTTCGGTTTATGTATTACCAGTATAG 1278 0.4124 MKTIEVFRVAPTLVSEELPTQTLLPLTSFDILWLRLPPVQRLFFYEFPHPTPLFFDTLLPKLKCSLSLALGYFYPLAGHLTWPLESNKPIINYTKATKSHHLLPQLTISHDQATVLALQVTLFPNYGFSIGVASHHAVLDGKTSTSFIKSWAYLCRESTSSLPPELSPFYNREVIKDPNELEAKYVSDWLKHGGPNNRSLKVWDLQVPEESTRGLFHLSRSDIEKLKQFVVSKQKGKNLHLSTFVLSVAYGLVCRVKAEEIKTKKILLALSIDCRNRLEPPVPPTYFGNCVGGRLVIVETRELLGEDGLIVAVEALSEALETLKDGVLSGAEDWSSWLLDGLFTDVKTIGTAGSPRFEVYNNDFGWGRPKKVDMASIDRTGALCLSDSKNGDGVEVSFVSNKVAMETFSSLFVKGLATSVYVLPV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00290 425 Gene3D - 1 96 IPR023213 -
Rops8g00290 425 Gene3D - 207 418 IPR023213 -
Rops8g00290 425 Gene3D - 97 201 IPR023213 -
Rops8g00290 425 PANTHER - 2 417 - -
Rops8g00290 425 Pfam Transferase family 15 86 - -
Rops8g00290 425 Pfam Transferase family 95 410 - -
Rops8g00290 425 SUPERFAMILY CoA-dependent acyltransferases 212 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00290 Rops-Chr8 5703864 5706644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00290 42 393 Monolignol Biosynthesis Gene Families AT5G48930 25.714 1.29e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00290 - - gmx:100805184 637.491