Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00287 ATGACTCAGGCGGTGGAGGTGTTGAATCGATATGGAACGGATCTGGTTGGGGAAGCGAGGGGTTCGGATTCGGAGTGTTTGGCGGGTTTTGAGTGTTTCTTGAACATTGTGAGGGCGTTGGGAATGGGATCGTGTATATCGGAGGTTGGGGCTGGTGGTGGTCCACCTCCTTTACTTCCTTGTTCGAATGATTCCAAATTGGATGGTGTGAAGAAGAGGAGGTTGAGGGGTTCGTCTTCCTTTGATTATAAAGTGCCTGGGAGGATGTTCTTCAATGGGTCTAGTGAGGTTGCATCTATGTATTGTAAGCAAGGTAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAGGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGAGTTGCAAAGAGAGTTAGGGATTCTTTCCCTTTAAAGCTTAATGCACAATGGGATTTGCATCATAAGAATAAAGATGGACTCAGTGATCACAACAGTTCCACAGGAAGTTATAATTCCGAAGGGCAATTTAGACTAGTTGATGAGAAACCTAGTCCCACTGATCATGAGCTTGATGGAACAGACACTATTTTGACACTAAAAGAATCTCTTTTGAAGGCTTGCAAGATTATGGACAAAGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCCTGGTAAAGCAGGGGCTGGACCTTGTCATTGGAAATGTTGGAGATTCAAGAGCTGTGTTGGGTACCCGAAATCATGATGATTCTCTTATTGCTGTTCAGTTAACCATTGACCTGAAGCCAAATCTGCCAAAGGAAGAAGAGAGGATCAGGCTTCGAAAAGGAAGGGTATTTTCCCTTCAGAATGAATCTGAGGTGGCTCGAGTTTGGTTGCCTAATTCTGATTTCCCTGGTCTGGCTATGGCTCGGGCATTTGGAGATTTTTGCCTGAAGGACTTTGGATTGATCGCTGTTCCAGATGTCTCGTATCACCGCCTTACTGAGAAGGATGAATTTGTTGTGTTGGCAACAGATGGGATATGGGATGTTTTATCAAACGAAGAAGTTGTGGACATTGTGGCATCTGCTCCACGGTCTACTGCTGCCCGGGTACTGGTTGAGTCAGCTGTTCATGCATGGAGGACAAAGTTCCCTTTTTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCGGATTCAGACTTCAAGTCAGAAGATACCACAGACAAGTTGGCACCAGAGGACTCAACTGACCAACCTGAGCTGTCATCTCTAGTTGGTGAGAAGGGAATTGGATCGGAAGCAGAAAAATAA 1356 0.4491 MTQAVEVLNRYGTDLVGEARGSDSECLAGFECFLNIVRALGMGSCISEVGAGGGPPPLLPCSNDSKLDGVKKRRLRGSSSFDYKVPGRMFFNGSSEVASMYCKQGRKGINQDAMLVWENFCSREDTIFCGVFDGHGPYGHRVAKRVRDSFPLKLNAQWDLHHKNKDGLSDHNSSTGSYNSEGQFRLVDEKPSPTDHELDGTDTILTLKESLLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGLDLVIGNVGDSRAVLGTRNHDDSLIAVQLTIDLKPNLPKEEERIRLRKGRVFSLQNESEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDVSYHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASAPRSTAARVLVESAVHAWRTKFPFCKVDDCAAVCLFFDSDSDFKSEDTTDKLAPEDSTDQPELSSLVGEKGIGSEAEK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00287 451 FunFam probable protein phosphatase 2C 33 92 413 - -
Rops8g00287 451 Gene3D - 93 419 IPR036457 -
Rops8g00287 451 PANTHER PROTEIN PHOSPHATASE 84 408 IPR015655 GO:0004722|GO:0006470
Rops8g00287 451 SUPERFAMILY PP2C-like 92 411 IPR036457 -
Rops8g00287 451 CDD PP2Cc 97 410 IPR001932 -
Rops8g00287 451 SMART PP2C_4 86 408 IPR001932 -
Rops8g00287 451 MobiDBLite consensus disorder prediction 414 430 - -
Rops8g00287 451 MobiDBLite consensus disorder prediction 414 451 - -
Rops8g00287 451 Pfam Protein phosphatase 2C 197 387 IPR001932 -
Rops8g00287 451 ProSiteProfiles PPM-type phosphatase domain profile. 97 410 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00287 Rops-Chr8 5594991 5599200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00287 77 438 PP2C-type Phosphatase Gene Family AT1G16220 57.979 3.85e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00287 - - gmx:100810538 797.349