Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00258 ATGGAGTGCAAACACCAAACACCAAGTGTAATGTTAAAATTGATGGGACTTGATAAAGTGCCTCCGCAACATCCTGTTAGAGATAAACAGAAAGTGCTGTCTCAGAATTACCTGCAGAAAGTTGCTTCTATTGGTGTCAGAAAGAAGCGTCCATCTTGCCAGCATCATTCCTTTGGAATGAGTACTGATGAAAAGGAAGAATCTGATGATGTTTTAAAAGTGTTCAAAACAATAAGGAGAGATAAGCACCATAACCCATCAAAGGGAAATGGGAAAGAGAACCCGTATTTGTCTGGAACAAAGGTAAAAAGTGTGCCACCACAGATATTGGATGCTTCAGTCAAGTGGAAGCCTGAAACCTTGGTTGATACCCCTTGTTCCTTTAATCTTGAAACAAGTGTGAATTCAAGGAAGATATCTGAGCAGGGAAATCTGCTACTGCAACAGAAAATGAATAATGGGTTGCAAAATGATGTACATGGAGAAGTTAAATCGTTTGAGACATTCAGGCTTTCAAAATCTCAATTAGATCTGAAGGATGAAACTTTCAACCCAAGAATGACTGTTTTGAAAGCAAATCCTGGAAAGGGCGGAAATGATTTAAAATATATTTCATTTCCTAGTTCTTGCAAGAATTCTCATTTGGCTGATGGGCTGTTCAAAGAGATATTTTGTCCAAAAAGCTTAAGAGTATATCATGGAATGACAGATAGAAAGAAACACCGGAATTTTGGTAAGCAGAGTTCTAGATCATTTAGAAAAAATTCAGAGGAGGTTTCTGTGCAAACAGGAAATGTTGCAAACAGAGTTTTAGATACCGTTTCAAGTTCATTTTTCAGAGGGAATGAAGCATTTGCCAGAAGTTCTGATATGCTGGAGCCTGCTCCAAATGTTTCAGTTAATGATATCCAACGCAATTCCCTGTTCTGTTCTGATGATTCATATGTAGGCTCTGAAGCCAAAGACAAAACATTGGAACAGAAGGCTGTGACTGAAAAATTGCAAGAAGTTGGGTGGCATGGTAATGACAGTACCCATCACCAGTTGCCTATGGTTTTAAAACATGGAAACGGATCAAGAAAGTTGAGTTATCAAAGTGGTTTTAGCAATGATAAAATTAGAAGGAACGTGAGATGTAAGGTTGGTATGAATTACAGTTTTGCCAGAAAAGTGCCAACATCCAGACCTCTTTGTGCAGCTTCTATTGTTGCTGATAATTGTGGAACTATGACCAAGGATGACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAGTGCATCTGCAAATTGGTCAACCCAGAAGTCAAAGAATCAAAATGTTAACCAGAAAGGTCGTTCAGAAGATATGAACCTGAGGTACAGCAGTGAGAAATCTCCATCTTTTTCCTCTTATTTCAGTAGTAATCATACTGAAGAGAATTGTATTAGCCTGCATAAGTTGAAGAAGAGATGTTACGGGAATGATTTGTCTGATAAGAAACCTGTGCTTCCTCAATTGTCAAGGTCTGGTCCTTCTCCTGCCATCATAGACAATCAGATCTTGCAAGAGACTTGCTTAGTGAACAATGAAGTGAACAACAATAAGTATGACAACATTGTGTCTCCTGATTCTTCAGTTGATTGCTTGGAGTCTGATGCAAAGACTGAGGTTGTTGGCTGGTCAAATAATAATCCAACCAAGCAGCGACCTGAATCAACGGCCTCTGTTTTGACACATGGAGACAGTGATTCTTTGAGTCATACTTCTTGTGCGTCAACACAAAAGGATAAATCAGAATTTCAAGAAGATTCTGCTTATGGACTTTGCTCTGGGGCTGACCCTGATTCTCTTGGTAGCTTTGAGGAGGCATATGAACCTAGTCCAATTTCAGTATTGGATCCCTCATTCAGAGAAGACATTTCATCTAACTCTGAATGTGGTGCTGGTACATATGATTCCTCTGAATTGGATTATGAAGGATTTGATTTGAATGTTTCAAGTGATGAAGATTGTGGGAATGAATCTGTAGGTGACTTTGAAGAAAAGAAAGATATTGTAGGATTATCTAGAACCGAAGAAAGTAGGGATTTCTCCTATGTTGTTGAGGTCTTAACCGAGACAGGTATAGCTAATAGGAGCTTGTTCACAAACTCTTCTACATGGCACTCTGCAGAATGCTCCATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAACTTTGGAAGAGATCTGAAAGGCGGCTTCTCTTTGATCGCATTAATTTAGGGCTGCTAGAGATTCTCCAACCATATTTGTATGTTCCAATGTGGGAAAAACCTGTGTCAAGAAGGTTGATTGCTGAACCAAGCCAAGACATGATTGAGGAGGAGATGTGGGGGTGGCTTGTTTCCCAAGAAAAGAAAGCTGGTAAGGTGTCGGCAGATGATATGCTTGGAGGGGAAATTAGGTGGATAGAACTAGGTGAAGATATTGAAGACATTGTTAGAGAGATAGTTAAGTTGTTAATAGAGGATCTTGCAAATGAGATAGTTAGGTTGGAGAATTTTTGA 2544 0.3927 MECKHQTPSVMLKLMGLDKVPPQHPVRDKQKVLSQNYLQKVASIGVRKKRPSCQHHSFGMSTDEKEESDDVLKVFKTIRRDKHHNPSKGNGKENPYLSGTKVKSVPPQILDASVKWKPETLVDTPCSFNLETSVNSRKISEQGNLLLQQKMNNGLQNDVHGEVKSFETFRLSKSQLDLKDETFNPRMTVLKANPGKGGNDLKYISFPSSCKNSHLADGLFKEIFCPKSLRVYHGMTDRKKHRNFGKQSSRSFRKNSEEVSVQTGNVANRVLDTVSSSFFRGNEAFARSSDMLEPAPNVSVNDIQRNSLFCSDDSYVGSEAKDKTLEQKAVTEKLQEVGWHGNDSTHHQLPMVLKHGNGSRKLSYQSGFSNDKIRRNVRCKVGMNYSFARKVPTSRPLCAASIVADNCGTMTKDDLFQKYWGLRKSASANWSTQKSKNQNVNQKGRSEDMNLRYSSEKSPSFSSYFSSNHTEENCISLHKLKKRCYGNDLSDKKPVLPQLSRSGPSPAIIDNQILQETCLVNNEVNNNKYDNIVSPDSSVDCLESDAKTEVVGWSNNNPTKQRPESTASVLTHGDSDSLSHTSCASTQKDKSEFQEDSAYGLCSGADPDSLGSFEEAYEPSPISVLDPSFREDISSNSECGAGTYDSSELDYEGFDLNVSSDEDCGNESVGDFEEKKDIVGLSRTEESRDFSYVVEVLTETGIANRSLFTNSSTWHSAECSISPSVFEILEKKFGEQQLWKRSERRLLFDRINLGLLEILQPYLYVPMWEKPVSRRLIAEPSQDMIEEEMWGWLVSQEKKAGKVSADDMLGGEIRWIELGEDIEDIVREIVKLLIEDLANEIVRLENF* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00258 847 MobiDBLite consensus disorder prediction 78 102 - -
Rops8g00258 847 Coils Coil 834 847 - -
Rops8g00258 847 Pfam Domain of unknown function (DUF4378) 689 840 IPR025486 -
Rops8g00258 847 MobiDBLite consensus disorder prediction 551 588 - -
Rops8g00258 847 PANTHER AFADIN 1 99 - -
Rops8g00258 847 MobiDBLite consensus disorder prediction 551 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00258 Rops-Chr8 5179507 5185506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00258 602 842 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.840 1.63e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00258 - - lang:109354222 978.008