Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g00251 | ATGGTGGGCAACGACGATGCTCGCGCTCCCTGCCACCGGAAAATGTTCTGGCGTTCAGCCTCTTGGTCCTCCGCCCGTACTGCCGGCGCCGGCAACGCTTCCGGCGAGTCAGATAAGGATTTCACCGATCCCGATTCCGGCGCTGAGAACGTGAATAGGAGGTTCCCTCCGCCGCCATTGACACCACGATCGCAGCAAAATTGCAAGGCGCGGTCGTGCTTGCCGCCGCTTCAGCCACTCTCCATTGCTCGCCGGAGTTTGGACGAGTGGCCGAAGGCGAGTTCTGATGATATCGGAGAATGGCCGCAGCCACCTATAACCCCTGGTGGGAGAGGAGGTAACAATAACAACAATAATGGTGAAAGGTTGAAACTTGATTTGTCTTCTATTCAGCAGAACAACCCTGATCATAAGAACAATGGTGGGCTTGTGAAGAGGGACAAGATTGCATTTTTTGATAAGGAATGTTCTAAAGTTGCTGAGCATGTTTACCTTGGTGGTGATGCTGTTGCTAGGGATAGGGATATTTTGAAAAAGAATGGGATCACTCATGTTTTGAATTGTGTTGGTTTTGTGTGTCCTGAGTACTTCAAAGCTGATTTTGTGTATAGGACTTTGTGGTTGCAGGATAGTCCTTCTGAGGATATCACTAGTATTTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAGGGTGGGAGAGTGTTTGTGCATTGTTGTCAAGGGGTGTCTAGGTCTACTTCTTTGGTTATTGCTTACCTCATGTGGAGGGAAGGGCAGAGCTTTGAGGATGCTTTTGAGCTTGTGAAGGCTGCAAGAGGTATTGCTGATCCAAACATGGGTTTTGCTTGTCAGTTGTTGCAGTGCCAGAAAAGGGTCCATGCATTCCCTCTTAGCCCTAGCTCTTTGCTGAGAATGTATAGAATTGCACCCCACTCGCCGTATGATCCTTTGCATCTTGTCCCCAAAATGTTGACGGATCCATCTTCGAATGCTCTGGACTCCAGGGGTGCATTTATAGTGCAGATTCCTTCTGCAATATATGTTTGGATTGGTAAGCATTGTGAGGTCATCATGGAAAGGGATGCCAGAGGGGCTGTGGGTCAGATTGTCCGCTATGAGAGAGTGCAAGGACCTATTGTAATGATTAAGGAAGGTGAGGAACCAGCTTATTTTTGGGAGGCTTTTTCAAAATTTTTGCCTTTGAAGGACACATCTAGCAATAGAGTAGAAAGTAGCAGATCAAGTACTAAAATCTGGCCTGGTGAGAGGAAAGTGGACTCGTATGATGTTGATTTCGAAGTTTTCAAGAAAGCTATCACGGGAGGTTTTGTGCCTCCATTTGCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAAAGTTGTTGGAGTGTTTTAAGGCGTAAAGTTTCCTCTGCTAATATGAAGGAGTTTGTGTCAGCCCCTAAGTTATCCTTTCCGCGGGTTTATTCAGATTCCATGTTGTGTATTCATACATCAGCAAATTCATCTCTATCTTCGTCACTGTCATCGTCATCATCTCTGCCACTATCCTCTTCACCCTCTCATGTCTCTCCAGATTCCATTTCTTCTGATTCTAGCACTCATTCAAAGATTTTGTCAGATTTGTCCCCAGATTCTTCCACTTTAGTTTTGAGTTCTATTCCAGTATCTTCACCTTTGTCTAACTTCTCTAATTTGTCTCTCTCGTCAAATTTTACTTCTCAACCAGCGTCTAACAGTACAGATATCCGTGGTGTCAAGTTATCACTTCCATGTTCTCAGTCAGCCTCTTTACCATTGAAAAAACCATCAACTTCCCTTGCTGAACGCAGAGGTAGTTTGTCAAAGTCTTTGAAGTTGCCACTAATGAATGATAAGACACAAGTAATAGATAGACCATCAACTCATCATGCTAGTCGAGAATATGGGGTTCTTGTCAATGGCAACTTTAGCTGTTCGCAACAATCAGATAGTATAGATTACATTTTTGAGTCCAACAACCTTGTCAAGGATGGAAGTGCAAATCCAATTCAACAGTGTGAATTGGCATTATGCCTGGGCATTGTTGATAATGTGGACTTCAAGGAATCTTCACTTCTCAGGAACCGTGTTGAGCCTTCGATGGATAGTTCCTCAAGAGAAGACTTAAAGTCTACATCATCAAAGGGAACTAATGAGAGTGGCTTGTTGCAATGTAGTATGGCACAGACTTTAGCATATCACTGGCCCAGTTTAGAAAGGATTGAGACATTTGGTGCAAGTCATTTAGATTCTAAAGCTGCTTTTGTTGTATTCTCTCCAAGTAATGTACATGCAGGAAATGTTTTATATTTATGGGTAGGGAGGTCATTCAAGTGTGATACCTCACAGGTTCGGTTAGATAGTGATAGACAGTCTGATTTTCTTGGAGCAGTTGACTGGAATCAAATTGGTTGTGATCTCCTTGCTCGGTTTAGTTTGCCAAAGAATACACTGATCAAGATTGTTAAAGAGAATGAAGAACCACGAGAGTTCCTTGCTTTGCTGAATTCATTGTAG | 2556 | 0.437 | MVGNDDARAPCHRKMFWRSASWSSARTAGAGNASGESDKDFTDPDSGAENVNRRFPPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGGNNNNNNGERLKLDLSSIQQNNPDHKNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKKNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFELVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSNALDSRGAFIVQIPSAIYVWIGKHCEVIMERDARGAVGQIVRYERVQGPIVMIKEGEEPAYFWEAFSKFLPLKDTSSNRVESSRSSTKIWPGERKVDSYDVDFEVFKKAITGGFVPPFASSEDEHETHLPARESCWSVLRRKVSSANMKEFVSAPKLSFPRVYSDSMLCIHTSANSSLSSSLSSSSSLPLSSSPSHVSPDSISSDSSTHSKILSDLSPDSSTLVLSSIPVSSPLSNFSNLSLSSNFTSQPASNSTDIRGVKLSLPCSQSASLPLKKPSTSLAERRGSLSKSLKLPLMNDKTQVIDRPSTHHASREYGVLVNGNFSCSQQSDSIDYIFESNNLVKDGSANPIQQCELALCLGIVDNVDFKESSLLRNRVEPSMDSSSREDLKSTSSKGTNESGLLQCSMAQTLAYHWPSLERIETFGASHLDSKAAFVVFSPSNVHAGNVLYLWVGRSFKCDTSQVRLDSDRQSDFLGAVDWNQIGCDLLARFSLPKNTLIKIVKENEEPREFLALLNSL* | 852 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g00251 | 851 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 214 | 275 | IPR000387 | GO:0016311|GO:0016791 | |
Rops8g00251 | 851 | Pfam | Dual specificity phosphatase, catalytic domain | 163 | 293 | IPR000340 | GO:0008138|GO:0016311 | |
Rops8g00251 | 851 | SMART | VILL_6 | 304 | 401 | IPR007122 | GO:0051015 | |
Rops8g00251 | 851 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 239 | 249 | IPR016130 | GO:0016311|GO:0016791 | |
Rops8g00251 | 851 | MobiDBLite | consensus disorder prediction | 521 | 545 | - | - | |
Rops8g00251 | 851 | Gene3D | Severin | 306 | 403 | IPR029006 | - | |
Rops8g00251 | 851 | SUPERFAMILY | Actin depolymerizing proteins | 754 | 850 | - | - | |
Rops8g00251 | 851 | CDD | DSP | 156 | 290 | - | - | |
Rops8g00251 | 851 | MobiDBLite | consensus disorder prediction | 88 | 122 | - | - | |
Rops8g00251 | 851 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 155 | 297 | IPR020422 | GO:0006470|GO:0008138 | |
Rops8g00251 | 851 | SUPERFAMILY | Actin depolymerizing proteins | 302 | 407 | - | - | |
Rops8g00251 | 851 | SMART | dsp_5 | 155 | 294 | IPR020422 | GO:0006470|GO:0008138 | |
Rops8g00251 | 851 | PANTHER | MKPA PROTEIN | 11 | 848 | - | - | |
Rops8g00251 | 851 | Gene3D | Protein tyrosine phosphatase superfamily | 130 | 297 | IPR029021 | - | |
Rops8g00251 | 851 | MobiDBLite | consensus disorder prediction | 709 | 726 | - | - | |
Rops8g00251 | 851 | MobiDBLite | consensus disorder prediction | 20 | 73 | - | - | |
Rops8g00251 | 851 | MobiDBLite | consensus disorder prediction | 709 | 733 | - | - | |
Rops8g00251 | 851 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 149 | 296 | IPR029021 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g00251 | Rops-Chr8 | 5067696 | 5073072 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g00251 | 2 | 191 | Protein tyrosine phosphatase (PTP) family | AT3G55270 | 61.579 | 2.77e-65 | 231 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g00251 | - | - | vum:124838930 | 1267.29 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops8g00251 | 8 | 5067696 | 5073072 | Rops8g00251 | 8 | 5067696 | 5073072 | ECH |