Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00241 ATGATTGAGGAATGGGGTTTGAAGTCTTTTCAACACAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCTTAGCTGAAGAAAATGTGGGATATGAGAATTCTTCCAGAATTGAACCAAAGCGAAGTCATCAGTGGTTTATGGATGCAGGTGAATCAGAAATATTCAGCAAGAAACAAGCAGTTGAAGCTGCTAGTGGCAGGCCAGTTTCAGGAGTTTCACATGTGAATGTTTCTCAATGGGACACCAATTCAGGATTTCATTCAGTCACAGGTCAATTTTCCGACCGTCTCTTTGGATCTGATCTTGTACGGACTGTCAATTTGGTTGATAAGAACATGCCATCAATTGGAAGTGGAAATCTGAATGTGGGAAGGAAGGATTTTGGGAATCAATATGGTAATGATCCGTCTGTGGGATTATCAATATCTCATGCCATAGGAGGTCCTTCATCATGTCTAAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAATTGCATGCCTGCAGCATCCATGGGGCACTCCTATAGTAGGGCTGACAATAGTACAATTTCAATAGGTGCTGGCTACAATAAAAATGATGGAAATATTTCATTGGCCCCAACGTATAACAACGGAAATGGCAACACCATTGCCATCGGGACCAGAATAGGTAAGACTGATGACAATCTTGTTTCAATGGGTCACAACTTCAACAAAGGAGATGGGAGCTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATTTTATCAATGGGTCAGCCCTTTGATAGGGGAGATGGAAATTTCATATCAATGGGTCAGTCATATGAAAAGGAAGATGGCAATTTGATATCTCTGGGTACCTCATATACCAAGGGGAATGAGAGCTTTGTATCAATGGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTCTTATGACAAGGGCACTGATCATATAATGTCAATGGGTCCAACATATGATAAGGTGGATTCAAACATTGCATCAACAGTTCCATCATATGACGGAGGCGATTCTAGCTCTTTTCCTGTCGGTCAAAACCACAATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGACCCAGAACCAAATCCCCCTGGTGGAATCATTAGTGGCTATGATCTGTTGATGGTCAACCAGAACTCAACTCAAGGTTTGGATAGCCAGAAGGATTTGACTGAGCTGAACTCTGAACCTCCTGTAAATAGCACTCCAAAACCTAATACTAAAAATGATACTATCCTTAAGAACAAAGAGCCGAAGACAACAAAGAAGGCTCCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAATCTTAAAGGAATCATAAAAGGAACTGGGTACTTGTGTTCATGTGATGACTGTCAGCAATCAAAGCCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCACATATATTTTGAGAATGGAAAAACCATCTATGCTGTCGTTCAAGAGCTGAAAAACACTCCTCAGGAGAATCTTTTTGATGCAATTCAAAATGTGACTGGCTCCACCATCAACCAAAAGAACTTTCGTATTTGGAAAGCTTCATACCAAGCTGCTACTCGGGAGCTGCAGCGTATCTATGGAAAGGATGAAGTGGTCATACCATCTTGA 1767 0.4092 MIEEWGLKSFQHKSFWMPRDAGCLAEENVGYENSSRIEPKRSHQWFMDAGESEIFSKKQAVEAASGRPVSGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLVRTVNLVDKNMPSIGSGNLNVGRKDFGNQYGNDPSVGLSISHAIGGPSSCLNFGGIRKVKVNQVRDSDNCMPAASMGHSYSRADNSTISIGAGYNKNDGNISLAPTYNNGNGNTIAIGTRIGKTDDNLVSMGHNFNKGDGSFMLMGHNYGKGDESILSMGQPFDRGDGNFISMGQSYEKEDGNLISLGTSYTKGNESFVSMGPTYGKSGENFITVAPSYDKGTDHIMSMGPTYDKVDSNIASTVPSYDGGDSSSFPVGQNHNKGQSSTISFGGFHDDPEPNPPGGIISGYDLLMVNQNSTQGLDSQKDLTELNSEPPVNSTPKPNTKNDTILKNKEPKTTKKAPSNNFPSNVKSLLSTGIFDGVQVKYVSWSREKNLKGIIKGTGYLCSCDDCQQSKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQENLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVVIPS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00241 588 MobiDBLite consensus disorder prediction 349 390 - -
Rops8g00241 588 MobiDBLite consensus disorder prediction 349 374 - -
Rops8g00241 588 MobiDBLite consensus disorder prediction 411 450 - -
Rops8g00241 588 PANTHER AUTOIMMUNE REGULATOR 15 537 - -
Rops8g00241 588 MobiDBLite consensus disorder prediction 411 430 - -
Rops8g00241 588 Pfam Tify domain binding domain 481 536 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00241 Rops-Chr8 4979516 4987839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00241 440 569 PHD Transcription Factor Family AT3G53680 56.154 1.40e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00241 - - gmx:100782217 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00241 8 4979516 4987839 Rops8g00241 8 4979516 4987839 ECH
Rops6g01125 6 25868234 25872446 Rops8g00241 8 4979516 4987839 ECH