Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00238 ATGCAGCCCCCATTGGTGCAACCAAACACTTCTCCTTGTTCCTGTTCTTCCCATAACTCTCGACTCCACGTCCATGCAACCCCCACCATGCACTACATGAACCCCACGTACCACATTGGAGTGCCCTGGTTGCCTTCCACTTCGTGCTTTAACTTTGACTCGCTCAGTCTCATCAAAGGAGCATGCGGTTCCCTTTATCTCTTCCAATGGTTGCCACGGCTGCATGTCTCGTCATCACCGTGCAGCCCCTTTGAAGATAACACGACCACCATCTTCATTCGGGTGGATATGCAGGAACTTGCATCTCGGGCAGTGCATTCTTATAATTTTGACCTTGAAGATTTGCTGAGAACTTCGGCTGAAGTTCTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAACAGCAGTTGTGGTGAAAAGGTTGAAAGAAGTGGTGGTAGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATGGGATGGGTTGGACAGCATGCAAATGTCGTGCCACTCCGCGCTTACTATTATCCCAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCAGGTGGCAACTTATCCACACTCTTGCATGGCAGTCGGACAGATGGAAGAACTCCATTAGATTGGGACTCCCGAGTTAAAATATCACTTGGCATTGCCAAAGGAATCGCTCACATTCATTCTCGGTGGTGCCAAATTCACACATGA 726 0.478 MQPPLVQPNTSPCSCSSHNSRLHVHATPTMHYMNPTYHIGVPWLPSTSCFNFDSLSLIKGACGSLYLFQWLPRLHVSSSPCSPFEDNTTTIFIRVDMQELASRAVHSYNFDLEDLLRTSAEVLGKGSYGTAYKAILEESTAVVVKRLKEVVVGKRDFEQQMEIMGWVGQHANVVPLRAYYYPKDEKLLVYDYVPGGNLSTLLHGSRTDGRTPLDWDSRVKISLGIAKGIAHIHSRWCQIHT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00238 241 PANTHER OS05G0588300 PROTEIN 38 234 - -
Rops8g00238 241 Pfam Protein tyrosine and serine/threonine kinase 120 237 IPR001245 GO:0004672|GO:0006468
Rops8g00238 241 Gene3D Phosphorylase Kinase; domain 1 90 192 - -
Rops8g00238 241 SUPERFAMILY Protein kinase-like (PK-like) 121 240 IPR011009 -
Rops8g00238 241 ProSiteProfiles Protein kinase domain profile. 117 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00238 241 Gene3D Transferase(Phosphotransferase) domain 1 193 241 - -
Rops8g00238 241 FunFam pollen receptor-like kinase 1 87 192 - -
Rops8g00238 241 ProSitePatterns Protein kinases ATP-binding region signature. 123 154 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00238 Rops-Chr8 4955408 4956266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00238 107 234 Receptor kinase-like Gene Family AT5G58300 78.125 7.27e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops8g00238 PK_Tyr_Ser-Thr 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00238 - - gmx:100796171 228.024