Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00235 ATGGCATCAACAAGTGAGAAAGCGGCCATAGGAATCGATCTAGGAACATGCTACTCGTGCGTTGGAGTGGTGCAGCATGGTCTGGTGCACATCATAGTCAACGACCAAGGCAACAGATTAACACCCTCTTATGTTGCCTTCACTGAAACCCATAGGATGATTGGTGATGCTGCTTTCAATCAGGCTGCTATCAACCCAACCAACACTGTCTTTGTGTGGCTTGAAGTCAATGTGGTTGCGGAACTTGAGGAATTTGAGCATTATAGGAGTGTTCTTTCGAAGGTCTTTGATCCGGTTATTTTGAAGATGATAAAAGAAGAGGATAATGGGGTCCCAACTGGTACTGCTACTAATAAGAAAAAGAATAGCTGGACCTCATTTTACCCTCATTCTTCCTGGCCCAACAGAGAAGGAGGAGCTGACCCTCAACTGCCCAATCACACGGGGGCTGAGATTCATCACCTACAACTTGAAATACAGGTTGCGAAAAAGCAATCAGAACTAAATCGTTATTCAAGAAGCAAGATAGACACCAGAAACTGA 543 0.4457 MASTSEKAAIGIDLGTCYSCVGVVQHGLVHIIVNDQGNRLTPSYVAFTETHRMIGDAAFNQAAINPTNTVFVWLEVNVVAELEEFEHYRSVLSKVFDPVILKMIKEEDNGVPTGTATNKKKNSWTSFYPHSSWPNREGGADPQLPNHTGAEIHHLQLEIQVAKKQSELNRYSRSKIDTRN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00235 180 MobiDBLite consensus disorder prediction 111 132 - -
Rops8g00235 180 FunFam heat shock 70 kDa protein-like 3 120 - -
Rops8g00235 180 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Rops8g00235 180 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
Rops8g00235 180 SUPERFAMILY Actin-like ATPase domain 8 71 IPR043129 -
Rops8g00235 180 MobiDBLite consensus disorder prediction 110 147 - -
Rops8g00235 180 PRINTS 70kDa heat shock protein signature 36 48 - -
Rops8g00235 180 PRINTS 70kDa heat shock protein signature 58 66 - -
Rops8g00235 180 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00235 180 Gene3D - 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00235 Rops-Chr8 4932537 4939183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00235 1 71 Calmodulin-binding Proteins AT3G12580 73.239 3.39e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00235 K03283 K14823 ely:117268256 112.079