Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00233 ATGGCATCAAAAGTGGCCATAGGAATCGATCTAGGGACATGCTACTCGTGCGTTGGAGTGTGGCAGAACGATCAGGTGCAGATCATAGTCAACGACCAAGGGAACAGAACGACACCCTTATATGTTGCCTTCACTGAAACCCAAAGGATGATTGGTGATGCTGCTATCAACCAGGCTGCTATCAACCTAGCCAACACTGTCTTTGAAAGTGATGATTTTGAGTATTATGGGAGCCTTCTTTCGAGTGTCTTTGATCCGGTAATTATGAAGATGATAAAATACAAAGATAACCGTGTGTCACCAGGTACTATTGCTGGCTCTGCTACTAATGGTAAAATGAAGCGCTGGTTAGCAACACTAGCAAAATATTCTCTCCATGCAGTGTATGCAAGTGTTACAGGTGACGTAATTGGGTTTGCTTCTTCTGTAATTGTTGACTGTTTGTCAAGAAATTAG 456 0.4276 MASKVAIGIDLGTCYSCVGVWQNDQVQIIVNDQGNRTTPLYVAFTETQRMIGDAAINQAAINLANTVFESDDFEYYGSLLSSVFDPVIMKMIKYKDNRVSPGTIAGSATNGKMKRWLATLAKYSLHAVYASVTGDVIGFASSVIVDCLSRN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00233 151 SUPERFAMILY Actin-like ATPase domain 4 75 IPR043129 -
Rops8g00233 151 Gene3D - 1 130 - -
Rops8g00233 151 PRINTS 70kDa heat shock protein signature 33 45 - -
Rops8g00233 151 PRINTS 70kDa heat shock protein signature 55 63 - -
Rops8g00233 151 PRINTS 70kDa heat shock protein signature 5 18 - -
Rops8g00233 151 PANTHER HEAT SHOCK PROTEIN 70KDA 6 73 IPR013126 GO:0005524|GO:0140662
Rops8g00233 151 Pfam Hsp70 protein 6 69 IPR013126 GO:0005524|GO:0140662
Rops8g00233 151 FunFam heat shock 70 kDa protein-like 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00233 Rops-Chr8 4863969 4866737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00233 3 70 Calmodulin-binding Proteins AT1G16030 73.529 1.27e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00233 K03283 - tps:THAPSDRAFT_269120 110.153