Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00219 ATGGCTGGAAAAGGAGATGGTCCTGCTATTGGAATAGATCTCGGCACCACCTACTCCTGTGTCGGAGTGTGGCAACACGACCGTGTTGAAATCATCGCTAATGACCAAGGTAACCGAACGACACCGTCTTACGTTGCTTTCACCGATTCCGAACGTTTGATCGGTGATGCTGCCAAGAATCAGGTCGCCATGAACCCTATAAACACCGTCTTTGGTGCCCCTGACATGGCTGGCGGTATGGATGATGAGGTTCCACCATCTGGTTCCGGTGGTGCTGGCCCCAAGATCGAAGAAGTTGATTAA 303 0.5149 MAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFGAPDMAGGMDDEVPPSGSGGAGPKIEEVD* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00219 100 SUPERFAMILY Actin-like ATPase domain 8 78 IPR043129 -
Rops8g00219 100 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00219 100 PANTHER HEAT SHOCK PROTEIN 70KDA 9 78 IPR013126 GO:0005524|GO:0140662
Rops8g00219 100 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00219 100 PRINTS 70kDa heat shock protein signature 36 48 - -
Rops8g00219 100 PRINTS 70kDa heat shock protein signature 58 66 - -
Rops8g00219 100 Pfam Hsp70 protein 9 78 IPR013126 GO:0005524|GO:0140662
Rops8g00219 100 Gene3D - 2 77 - -
Rops8g00219 100 FunFam Heat shock cognate 71 kDa protein 4 77 - -
Rops8g00219 100 MobiDBLite consensus disorder prediction 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00219 Rops-Chr8 4651012 4653719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00219 1 78 Calmodulin-binding Proteins AT5G02500 89.744 2.62e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00219 K03283 - rvl:131326375 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00219 8 4651012 4653719 Rops8g00219 8 4651012 4653719 ECH
Rops8g00219 8 4651012 4653719 Rops8g03194 8 70135778 70138402 ECH
Rops8g00219 8 4651012 4653719 Rops6g01144 6 26136913 26139892 ECH
Rops8g03194 8 70135778 70138402 Rops8g00219 8 4651012 4653719 ECH
Rops6g01144 6 26136913 26139892 Rops8g00219 8 4651012 4653719 ECH