Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00216 ATGGCCGGAAAAGGTGAGGGACCGGCGATCGGAATCGACCTCGGCACAACCTACTCCTGCGTCGGAGTGTGGCAGCACGATCGTGTTGAGATCATCGCCAATGATCAAGGGAACCGTACGACGCCGTCTTATGTTGCATTTACCGATACCGAAAGGTTGATTGGAGATGCTGCTAAGAACCAGGTCGCAATGAATCCGACCAACACCGTCTTCGGTGGGGCTGAAGCAGCAGGTGGTGAAGCGGATGGTGGTGCTGAACCTGCTGGTGGTGGCAGTGGTGCTGGCCCCAAGATCGAGGAGGTTGATTAA 309 0.5599 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFGGAEAAGGEADGGAEPAGGGSGAGPKIEEVD* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00216 102 MobiDBLite consensus disorder prediction 71 102 - -
Rops8g00216 102 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00216 102 FunFam Heat shock 70 kDa protein 1A 2 86 - -
Rops8g00216 102 PRINTS 70kDa heat shock protein signature 36 48 - -
Rops8g00216 102 PRINTS 70kDa heat shock protein signature 58 66 - -
Rops8g00216 102 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00216 102 SUPERFAMILY Actin-like ATPase domain 8 72 IPR043129 -
Rops8g00216 102 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Rops8g00216 102 Pfam Hsp70 protein 9 72 IPR013126 GO:0005524|GO:0140662
Rops8g00216 102 Gene3D - 2 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00216 Rops-Chr8 4621517 4624412 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00216 1 97 Calmodulin-binding Proteins AT3G12580 75.000 2.72e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00216 K03283 - cit:102609521 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00216 8 4621517 4624412 Rops8g00216 8 4621517 4624412 ECH