Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00208 ATGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCTTTCATTAGAGATGCATGCATTCACCCTTTGCGCCGTTCAATATGCCTTGATGATCACTCCATTGGGATTGTTTGGGTGCTTCCTTGGTCCCATGATGACAGGTATAAAGCAGACTTGGGCTATGCTATAGGATTCAACTACTGGGGCCACGGGATAGCCACCATGGCAGTGAAGATTGTTCTGTCCCAAGTCTTCCATGACTTTCCTGATTTGAGAAGGTTGCAGGCTTTTACTTTTGTAGAGAACCAGGCTTCCCAGAGGGTCCTGGAAAAGGTTGGGTTCCAAAGGGAGGGTTTGCTCAGACAGGTGGTTTATTACAGGGGGACTTTGAAGATTTATAATTTTTAG 384 0.4609 MKTCGSREEALAFIRDACIHPLRRSICLDDHSIGIVWVLPWSHDDRYKADLGYAIGFNYWGHGIATMAVKIVLSQVFHDFPDLRRLQAFTFVENQASQRVLEKVGFQREGLLRQVVYYRGTLKIYNF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00208 127 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 127 IPR000182 GO:0016747
Rops8g00208 127 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 122 - -
Rops8g00208 127 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 121 IPR016181 -
Rops8g00208 127 Gene3D - 1 124 - -
Rops8g00208 127 Pfam Acetyltransferase (GNAT) domain 24 107 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00208 Rops-Chr8 4467266 4467899 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g00208 Acetyltransf_3 1.8e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00208 - - gmx:100802886 193.741