Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00207 ATGGTGATGGCAATAGATCTGTCTAGAATCTCTATCCGGCCATTCAAGCTAAGTGACGTTGAGGATGTATTGTTATGGGGTGGAGATGATAGAGTGACTCAAAATACCCGAATGGAGACTCTAATTTCAAGGGTAGAAGCTTTGGCTTTCATTAGAGATGAATGCATTCACCCATTGAGACGTTCAATATGCCTTGATGACCGTTCCATTGGGATTGTTTGGGTGCTTCCTTTGCCCGGTGATGAAAGGTATAAAGCAGAGTTAGGGTATGCCATAGGGTTCAATTACTGGGGCCATGGAATAGCCACCACAGCATTGAAGATTCTCCTGTCCCAAGTCTTCCATGATTTCCCTGTTTTGAGAAGGTTGCAAGCTTATACTGTTGTAAAGAACAAGGCTTCCCAAAGGGTCTTGGAAAAGGCTGGGTTCCAAAAGGAGGGATTGCTTAGAAAGGTTTTTTATTTCAAAGGGAACTTTGAGGATTTCTATATTTTTAGTTTTTTGTCTACAGATAAAATTCCTCCTGCAAATGGAGAATCTTGCTGCAGCGGTTAA 555 0.4198 MVMAIDLSRISIRPFKLSDVEDVLLWGGDDRVTQNTRMETLISRVEALAFIRDECIHPLRRSICLDDRSIGIVWVLPLPGDERYKAELGYAIGFNYWGHGIATTALKILLSQVFHDFPVLRRLQAYTVVKNKASQRVLEKAGFQKEGLLRKVFYFKGNFEDFYIFSFLSTDKIPPANGESCCSG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00207 184 Gene3D - 4 168 - -
Rops8g00207 184 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 169 IPR000182 GO:0016747
Rops8g00207 184 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 172 - -
Rops8g00207 184 Pfam Acetyltransferase (GNAT) domain 9 144 IPR000182 GO:0016747
Rops8g00207 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 168 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00207 Rops-Chr8 4441448 4442105 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g00207 Acetyltransf_3 9.8e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00207 - - gmx:100802886 265.388