Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00204 ATGGCAAGACAAGATGAGGGATGGGCAGTAGGAATCGACCTTGGCACGACTTACTCATGTGTTGCAGTATGGCAAGAACAACATTGTCGAGTGGAGATCATCCACAATGACCAAGGCAACAGAACCACTCCTTCTTGTGTTGCTTTCACTGATAACCAAAGATTGATTGGCGATGCTGCTAAGAATCAGGCTGCTATCAACCCAACCAATACTAATGATCTTGAATCGTGGAATGGTGATGGGATGAACTTCGTTACCAGTCTAAGCGTGATTCAGCTTACCAAGGATCATAGTACTGATATGGAACACTGGAATTTTGTTTCTTGA 327 0.4373 MARQDEGWAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTDNQRLIGDAAKNQAAINPTNTNDLESWNGDGMNFVTSLSVIQLTKDHSTDMEHWNFVS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00204 108 Gene3D - 1 96 - -
Rops8g00204 108 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
Rops8g00204 108 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00204 108 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00204 108 PRINTS 70kDa heat shock protein signature 38 50 - -
Rops8g00204 108 PRINTS 70kDa heat shock protein signature 60 68 - -
Rops8g00204 108 SUPERFAMILY Actin-like ATPase domain 9 71 IPR043129 -
Rops8g00204 108 FunFam heat shock 70 kDa protein-like 3 100 - -
Rops8g00204 108 PANTHER HEAT SHOCK PROTEIN 70KDA 9 106 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00204 Rops-Chr8 4404464 4407129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00204 1 71 Calmodulin-binding Proteins AT3G12580 78.873 1.72e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00204 K03283 - gmx:102667572 131.339