Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00203 ATGGCAAGACAAGATGAGGGATGGGCAGTAGGAATCGACCTTGGCACGACTTACTCATGTGTTGCAGTATGGCAAGAACAACATTGTCGAGTGGAGATCATCCACAATGACCAAGGCAACAGAACCACTCCTTCTTGTGTTGCTTTCACCGTTAACCAAAGATTGATTGGCGATGCTGCTAAGAATCAGGCTGCTATCAACCCAACGAACACTGTCTTTGAGGATTTGAGACCTAGATGGCGAAATGGATGGGAGAATGTGACTGCATCATAA 273 0.4615 MARQDEGWAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTVNQRLIGDAAKNQAAINPTNTVFEDLRPRWRNGWENVTAS* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00203 90 FunFam heat shock 70 kDa protein-like 3 79 - -
Rops8g00203 90 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00203 90 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00203 90 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00203 90 SUPERFAMILY Actin-like ATPase domain 9 77 IPR043129 -
Rops8g00203 90 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00203 90 PRINTS 70kDa heat shock protein signature 38 50 - -
Rops8g00203 90 PRINTS 70kDa heat shock protein signature 60 68 - -
Rops8g00203 90 Gene3D - 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00203 Rops-Chr8 4385821 4390111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00203 1 77 Calmodulin-binding Proteins AT3G12580 75.325 1.18e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00203 K03283 - gmx:102667572 132.88