Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00202 ATGGCAAGACAAGATGAGGGATGGGCAGTAGGAATCGACCTTGGCACGACTTACTCATGTGTTGCAGTATGGCAAGAACAACATTGTCGGGTGGAGATCATCCACAACGACCAAGGCAACAGAACCACTCCTTCTTGTGTTGCTTTCACTGATAACCAAAGATTGATTGGCGATGCTGCTAAGAATCAGGCTGCTATCAACCCAACCAACACTGTCTTTGGACTTATTCCGTGGGTATCATTGAGTCACATCAAACCTTTTGGATTATAG 270 0.4556 MARQDEGWAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTDNQRLIGDAAKNQAAINPTNTVFGLIPWVSLSHIKPFGL* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00202 89 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00202 89 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00202 89 SUPERFAMILY Actin-like ATPase domain 9 85 IPR043129 -
Rops8g00202 89 Gene3D - 1 81 - -
Rops8g00202 89 PRINTS 70kDa heat shock protein signature 60 68 - -
Rops8g00202 89 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00202 89 PRINTS 70kDa heat shock protein signature 38 50 - -
Rops8g00202 89 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00202 89 FunFam heat shock 70 kDa protein-like 3 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00202 Rops-Chr8 4379681 4382208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00202 1 73 Calmodulin-binding Proteins AT3G12580 79.452 2.98e-34 121