Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00199 ATGGCGAGACAAGATGAGGGATGGGCAGTAGGAATCGACCTTGGCACGACTTACTCATGTGTTGCAGTATGGCAAGAACAACATTGTCGGGTGGAGATCATCCACAACGACCAAGGCAACAGAACCACTCCTTCTTGTGTTGCTTTCACTTATAACCAAAGATTGATTGGCGATGCTGCTAAGAATCAGGCTGCTATCAACCCAACCAACACTATCTTTGCGAAGGTTAAGATCCTGACTGTTTCTGCTGAGAATAAAACCACTGGCAATAAAAACGAGATTACCATAACCAATGACAGAGAAAGACTTTCAACAGAAGAAATTAAAAGATTAATTCAAGAAGCTGAGAATTACAAGGCTGAAGGTGAGAAATTCTTTAGGAAGGCTAATGCAATGAATGCTTTGGATTATTCTATTTACAAAATCAAGAATGCTTTAAAGAAGGATATCAATTCAAAGCTTTGTTCACAAGAAAAGGAGAAGATCAATTCTGCTATTACAAAGGCTACAGATTTGCTTGATGATGATAACCAGCCTAATGAAATAGATGTGTTTGAGGATTGTGTAAAAGAGCTTGACAGCGTCTTTCAAAACATTATGGGTAAGATTGGCTAG 615 0.3886 MARQDEGWAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTYNQRLIGDAAKNQAAINPTNTIFAKVKILTVSAENKTTGNKNEITITNDRERLSTEEIKRLIQEAENYKAEGEKFFRKANAMNALDYSIYKIKNALKKDINSKLCSQEKEKINSAITKATDLLDDDNQPNEIDVFEDCVKELDSVFQNIMGKIG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00199 204 Pfam Hsp70 protein 78 202 IPR013126 GO:0005524|GO:0140662
Rops8g00199 204 Pfam Hsp70 protein 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00199 204 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Rops8g00199 204 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 131 203 IPR029048 -
Rops8g00199 204 Gene3D - 110 202 IPR029048 -
Rops8g00199 204 SUPERFAMILY Actin-like ATPase domain 9 118 IPR043129 -
Rops8g00199 204 Coils Coil 101 128 - -
Rops8g00199 204 FunFam heat shock 70 kDa protein-like 3 118 - -
Rops8g00199 204 Gene3D - 7 109 - -
Rops8g00199 204 PANTHER HEAT SHOCK PROTEIN 70KDA 9 74 IPR013126 GO:0005524|GO:0140662
Rops8g00199 204 PRINTS 70kDa heat shock protein signature 38 50 - -
Rops8g00199 204 PRINTS 70kDa heat shock protein signature 8 21 - -
Rops8g00199 204 PRINTS 70kDa heat shock protein signature 60 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00199 Rops-Chr8 4294618 4301427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00199 1 73 Calmodulin-binding Proteins AT3G12580 76.712 7.52e-32 119