Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00195 ATGAATACTAATATTCCTACATTAAAAGAACAATTGTATGTTACTGATGAAGATAACCAATCCTCAATCCTGATTGAAGTTTATAAGGGTGAGAGGATAAGAGCCAGTGATAACAATTTGTTGGGTCTTTTTACTCTTTCTGGCCTTCCTCGTACTCCTCGAGGCCACCCTGTCAAAGTATGTTTTGCTATAGATGCTGATGGTATATTAGTTGTCTCAGCTAAGGAAGAAACCACTAGGAATAAGAAAAAGATTACCATAACGAATGAAAATGGAAGACTTTCAACTGAAGAAATTGAGAGAATGATTCAAGAAGCTGAGAATTACAAGGCTGAAGATTTGAAGTACAAGAAGAAGGTTAAAGCAATAAATGCTTTGGATAATTACATTTACTATATGAGTAAAGCTATGAAGGATATGTGTATTAGTTCGAAGCTTTCCCCATTAGACAAAATTAAGATCAATTTTGCAATTATAAAGGGAAGAAATTTGCTTGATGGCCAGCAGCAGCAAAAAACAAATGTGTTTGTTGATTATTTAAGGGAGCTTGAGAGCATATTTGAATCCGGAATGGCCAAGATCAACAATGATTGGATTGATGAAGGGGATAGTGATGAGGAATATTATTGA 630 0.3476 MNTNIPTLKEQLYVTDEDNQSSILIEVYKGERIRASDNNLLGLFTLSGLPRTPRGHPVKVCFAIDADGILVVSAKEETTRNKKKITITNENGRLSTEEIERMIQEAENYKAEDLKYKKKVKAINALDNYIYYMSKAMKDMCISSKLSPLDKIKINFAIIKGRNLLDGQQQQKTNVFVDYLRELESIFESGMAKINNDWIDEGDSDEEYY* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00195 209 Coils Coil 99 119 - -
Rops8g00195 209 Gene3D - 94 196 IPR029048 -
Rops8g00195 209 Pfam Hsp70 protein 2 181 IPR013126 GO:0005524|GO:0140662
Rops8g00195 209 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 92 IPR029047 -
Rops8g00195 209 PANTHER HEAT SHOCK PROTEIN 70KDA 2 149 IPR013126 GO:0005524|GO:0140662
Rops8g00195 209 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 122 195 IPR029048 -
Rops8g00195 209 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 2 127 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00195 Rops-Chr8 4104706 4105335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00195 2 194 Calmodulin-binding Proteins AT3G12580 56.186 3.20e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00195 K03283 - lja:Lj0g3v0151879.1 250.366