Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00190 ATGACAAACCCACTATTGTTGTTAAGTACAAGGGTGAGGAAAAACAACTTGTTGCTAAGGAAGCCTCATCTATATCCTCACCAAGATGCGGGAGATTGCAGAGGCATTTTGTTGAGTGACGACAATAAGAATGTTCCAAACTTGGAGCTATTGGATGTTACACCGCTCTCACTTGGTACATCGGTTAAAGGAGATCTCATGAGTAGGACAAGACCTAGTGATAACAATTTGCTGGGTCTTTTGACTCTTTTTGGCCTTCCTCGTGCTCCTCGAGGCCACCCTGTCAAAGTATGTTTTGCTATAGATGCCGATGGTATATCAGTTGTCTCTGCTAAGGAAGAAACCATTGGGAATAAGAAAGAGATTACCATACCGAATGAAAATGGAAGACTTTCAGCTGAAGAAATTGATCACAATAATTAA 423 0.4113 MTNPLLLLSTRVRKNNLLLRKPHLYPHQDAGDCRGILLSDDNKNVPNLELLDVTPLSLGTSVKGDLMSRTRPSDNNLLGLLTLFGLPRAPRGHPVKVCFAIDADGISVVSAKEETIGNKKEITIPNENGRLSAEEIDHNN* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00190 140 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 68 139 IPR029047 -
Rops8g00190 140 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 44 137 IPR029047 -
Rops8g00190 140 PANTHER HEAT SHOCK PROTEIN 70KDA 40 134 IPR013126 GO:0005524|GO:0140662
Rops8g00190 140 Pfam Hsp70 protein 70 137 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00190 Rops-Chr8 3970095 3970622 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00190 35 137 Calmodulin-binding Proteins AT3G12580 41.727 7.20e-23 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00190 K03283 - gmx:102667578 102.064