Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00189 ATGAATATCTTATCAACGTCACGTTCTGGTGAGGGTCACTTGACATATATGGAACTGCAAAGGCGATTACCTAAAGATGATATTGAAGCGGTTGGAGAAGATGAGTTATTCTTTGAATTTCGAGCCTTGGAGGTAGTGTTAGAAGCCATCTGTTGTTTCCTTGCTGCCCGTACAACAGAATTGGAGATAACTGCTTATCCCTCAGTAGATGAACTTACCTCCAAGATTAGCAGTCGTAATTTGGATAGAGTCCATAAATTGATGAATGCAATGATAAGGCTGACTGCTAGGGTTTAA 297 0.404 MNILSTSRSGEGHLTYMELQRRLPKDDIEAVGEDELFFEFRALEVVLEAICCFLAARTTELEITAYPSVDELTSKISSRNLDRVHKLMNAMIRLTARV* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00189 98 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 98 IPR039204 -
Rops8g00189 98 Gene3D Magnesium transport protein CorA, transmembrane region 8 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00189 Rops-Chr8 3940680 3941058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00189 18 98 MRS2 Gene Family AT5G64560 60.000 4.39e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00189 K16075 - twl:120012113 111.694