Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00188 ATGATCATGGCAAAAAAAGATGAGGGATGTGCCATAGGAATTGACCTTGGCACTACTTACTCCTGCGTTGCAGTGTGGCAGGATCAACACGATAGAGTGGAGATCATCCACAACGACCAAGGCAACAGAACTACACCTTCTTGTGTTGCTTTCACCAATGATCAAAGGTTGATTGGTGATGCTGCTAAAAATCAGGCTGCCTCCAACCCAGAGAACACTGTCTTTGGTACATTTTCTTATGCCTTTTGTTTAACATTTACTGTTATTAGTTCTGTTTTAGCTTTTAACAGGACAAATGATTGA 303 0.4125 MIMAKKDEGCAIGIDLGTTYSCVAVWQDQHDRVEIIHNDQGNRTTPSCVAFTNDQRLIGDAAKNQAASNPENTVFGTFSYAFCLTFTVISSVLAFNRTND* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00188 100 PRINTS 70kDa heat shock protein signature 10 23 - -
Rops8g00188 100 PRINTS 70kDa heat shock protein signature 40 52 - -
Rops8g00188 100 PRINTS 70kDa heat shock protein signature 62 70 - -
Rops8g00188 100 FunFam heat shock 70 kDa protein-like 5 95 - -
Rops8g00188 100 PANTHER HEAT SHOCK PROTEIN 70KDA 11 76 IPR013126 GO:0005524|GO:0140662
Rops8g00188 100 Pfam Hsp70 protein 11 76 IPR013126 GO:0005524|GO:0140662
Rops8g00188 100 SUPERFAMILY Actin-like ATPase domain 10 80 IPR043129 -
Rops8g00188 100 ProSitePatterns Heat shock hsp70 proteins family signature 1. 14 21 IPR018181 -
Rops8g00188 100 Gene3D - 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00188 Rops-Chr8 3868022 3868324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00188 3 75 Calmodulin-binding Proteins AT3G12580 80.822 1.90e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00188 K03283 - lja:Lj1g3v3137760.1 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00188 8 3868022 3868324 Rops8g00188 8 3868022 3868324 ECH