Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g00145 | ATGTTGTCCCTCTCTTCTCTCATCGCCATCTTCATCTTCTCTCTCCACCGTACGACGTCGTTATCTCTCTCTAGCTGCCATAACACAACCTTCAACTGTGGCACCATCACCAACCTTTCCTACCCTTTCACCGGCGGTGACCGCCCCTCCTTCTGTGGGCCACCACAGTTCCATTTGAGCTGCAACGACGACGTTCCCGAGTTGAATATCTCATCAGTGAGTTACCGAGTCGTTCAAATCAACTCGGCGACTAGCACCCTCACCTTAGCAAGATTAGACCTTTGGAACAATACATGTACCCATCACTACGTTAACTCAACTTCTGATGACACCAGTTTTAGCTACGGTTCAGGGAACCGTAACCTCACCTTGTTTTATGGGTGCAAACCCACTTCCGCATTCACCAATAAACCAGATAATTTATTTCAGTGTGAGGGTAATGGGGATAAGAGTGATTCTTATTCTTTGGTTGGTCCATTTCCTTTGGACCCAGTTCTTAGCTTTGTTGAATGTGAGGAACGTGTTGGGGTGCCAATTCTTGAAGAGCAGGCTGATAGGCTTGTAGAAAACCGTTCTTTGCTTAGGGAAGTTTTGATGAAGGGGTTTAATGTGAATTATAGCAATCCTTATGACAATGATTGTTTGGAGTGTCTTGCTTCTGGTGGCCAACAGTGTGGGTTTGATTCTGATGACAATGAACCCATTTGTATCTGTGGTGATCAGTTGTGTTCATCTCCAGAAAATGGCAGCTCCAAAAAAGTAGCAATTGGAATAGGCGTTGCTGCTGGAGTTGCAGCCCTTGCTGGTATTCTTGGCTTCGTGTGCTTTAAAGTGCAACGAAGGAGAAAAATTGCTGAGCAATCAAGAGGCAAAGACCGCTTCATGCAGAATTCAAGCAGTGTCGCTCTTACCTCTACTACAAATTTGTCTCAAAGTGTCTCTTCTTACCCCTCTTCCAAGTCTGACACAGTGCAGAATAGTTTCTACTTTGGTGTCCACGTGTTTGACTATGCTGAACTAGAGGAAGCTACCAAGAATTTTGACACTTCTAGAGAACTTGGTGAGGGAGGTTTTGGCACTGTTTACAAAGGTGAACTCAAAGATGGACGTGTGGTGGCAGTGAAACGCCATTATGAAAGCAACTTTAAACGTGTTGAGCAGTTCATGAATGAAGTTCAGATTCTAGCTCGCTTAAGGCATAAGAACCTTGTGACACTCTATGGATGCACCTCTAGACACAGCCGAGAACTTCTCCTTGTTTATGAATTCATTCCTAATGGAACAGTGTCTGATCATCTTCATGGAAACCGATCAAAATCGACTTTAATCCCTTGGCCTGTAAGATTGAACATTGCAATAGAAACAGCTGAGGCACTAACCTACCTCCATACAAAAGATGTCATACACCGTGATGTTAAATCCAACAACATTCTCCTAGATGAAAAATTTCATGTAAAGGTTGCTGATTTTGGTCTCTCACGGTTGTTCCCACATCATGTCACTCATGTGTCAACTGCTCCACAAGGAACACCTGGTTATGTTGACCCTGAGTATTATCAGTGCTACCAACTCACTGATAAGAGTGATGTTTATAGCTTTGGGGTCCTCTTAATTGAGCTCATATCTTCATTACAAGCTGTGGACATCAGCAGGCATCGCAATGATGTGAACTTGGCTAATATGGCCATCAATAAAATTCAGAACCAAGAATTGCATGAGTTGGTTGATCCATATCTTGGATTTGAAAAAGACTATGCTGTGAGTCAGATGATAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAGCAGAGAGACATGAGACCCTCCATGGATGAGGTGCTGGAGATCTTGAGAGGAATCAAGAGTGAAGAGCTTGACACAAGGGAAGCAAAAGTAGTGGATGTTAGGATAGATGAACTTGTACTTTTGAAGAAGGTTCCTTCCCCAGTTTCACCAAATTCAGTTGCTGATAGATGGACAAGGGAGATGCTAAGAACGGCTTAA | 2010 | 0.4363 | MLSLSSLIAIFIFSLHRTTSLSLSSCHNTTFNCGTITNLSYPFTGGDRPSFCGPPQFHLSCNDDVPELNISSVSYRVVQINSATSTLTLARLDLWNNTCTHHYVNSTSDDTSFSYGSGNRNLTLFYGCKPTSAFTNKPDNLFQCEGNGDKSDSYSLVGPFPLDPVLSFVECEERVGVPILEEQADRLVENRSLLREVLMKGFNVNYSNPYDNDCLECLASGGQQCGFDSDDNEPICICGDQLCSSPENGSSKKVAIGIGVAAGVAALAGILGFVCFKVQRRRKIAEQSRGKDRFMQNSSSVALTSTTNLSQSVSSYPSSKSDTVQNSFYFGVHVFDYAELEEATKNFDTSRELGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVEQFMNEVQILARLRHKNLVTLYGCTSRHSRELLLVYEFIPNGTVSDHLHGNRSKSTLIPWPVRLNIAIETAEALTYLHTKDVIHRDVKSNNILLDEKFHVKVADFGLSRLFPHHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVLLIELISSLQAVDISRHRNDVNLANMAINKIQNQELHELVDPYLGFEKDYAVSQMITAVAELAFRCLQQQRDMRPSMDEVLEILRGIKSEELDTREAKVVDVRIDELVLLKKVPSPVSPNSVADRWTREMLRTA* | 670 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g00145 | 669 | Pfam | Wall-associated receptor kinase galacturonan-binding | 26 | 90 | IPR025287 | GO:0030247 | |
Rops8g00145 | 669 | Gene3D | Transferase(Phosphotransferase) domain 1 | 424 | 637 | - | - | |
Rops8g00145 | 669 | Pfam | Protein kinase domain | 348 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g00145 | 669 | SUPERFAMILY | Protein kinase-like (PK-like) | 323 | 623 | IPR011009 | - | |
Rops8g00145 | 669 | FunFam | Wall-associated receptor kinase-like 20 | 424 | 632 | - | - | |
Rops8g00145 | 669 | Gene3D | Phosphorylase Kinase; domain 1 | 318 | 423 | - | - | |
Rops8g00145 | 669 | ProSiteProfiles | Protein kinase domain profile. | 347 | 627 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g00145 | 669 | CDD | STKc_IRAK | 353 | 622 | - | - | |
Rops8g00145 | 669 | ProSitePatterns | Protein kinases ATP-binding region signature. | 353 | 375 | IPR017441 | GO:0005524 | |
Rops8g00145 | 669 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 319 | 423 | - | - | |
Rops8g00145 | 669 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 | |
Rops8g00145 | 669 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 4 | 662 | IPR044652 | GO:0004672 | |
Rops8g00145 | 669 | Pfam | Wall-associated receptor kinase C-terminal | 165 | 241 | IPR032872 | - | |
Rops8g00145 | 669 | SMART | serkin_6 | 347 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g00145 | Rops-Chr8 | 3357167 | 3360505 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g00145 | 31 | 662 | Receptor kinase-like Gene Family | AT1G25390 | 42.879 | 6.42e-150 | 447 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Rops8g00145 | Pkinase | 6.7e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g00145 | - | - | cam:101490779 | 1020.38 |