Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00144 ATGGTTTGGAGGAGCTTATGCGAAAACAGTGTCCCCAAGATGACCATCAATTTCCTCAAATACCGTATTCTTCAATGGAACTTTACAACACAGAAGCTCACAGTGGCTAGGGACGATTACTGGGCTGGCATATGTACGTGCGTTCAAACTTTGGAATTTCAAATCAAAGTATCCTCCCTACCAATGGTTCGCGCGTGCTATCCTCCACCACAGCCACATCAAAAGGAGAGTAGTTCCAACTTTAGTGGTGTCCACGTGTTTTCCTATGCTGAACTAGAGGAAGCTACCCAAAATTTTGACAATTCTAAAGACCTTGGTGAGGAAGGTTTTGGCACTGTTTACAAAGGTGAACTCAGAGAAGGACCTTGCTTACGGCATAAGAACCTTGTGACACTCTATGGATGTACCGCTAGACACAGCCGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACAGTGGCTGATCATCTTCATGGGAAACGACCAAAATCAACTTTACTCCCTTGGCCTGTAAGATTGAACATTGCAAAAGAAATAGCTGAGGCACTAGCCTACCTCCATGCTTCAGATGTCATACACCGTGATGTTAAATCCAACAACATTCTCCTAAATGATAAATTTCATGTAAAAGTTGCAGATTTTGGTCTTTCACGGTTGTTCCCAAATAATGTCACTCATGTGTCAACTGCTCCACAAGGAACACCTGGCTATGTTGACCCTGAGTACCATGATTGCTTCCAACTCTCTGATAAGAGTGATGTTTATAGCTTTGGGGTTGTCTTAGTTGAGCTCATATCATCATTACATGTTTTGGACTTCAGCAGGAATGATGTGATTTTAGCTGATATGGCCGTCAATAAAATTCAGAACCAAGAATTGCATGAGTTGGTGGATCCATATCTTGGATCTGAGAAAGACTATGCTGTAAGGCAGATGACAACAGAAGTGGCAATATTGGCTTTTAGGTGTTTGCAGCGGCAGAGAGACATGAGACCCTCAATGGATGAGGTGCTAGAGATCTTGAGAGGAATCACGAGTGACGAGATTAACACAGGGAAGCAAAAGTAG 1074 0.4264 MVWRSLCENSVPKMTINFLKYRILQWNFTTQKLTVARDDYWAGICTCVQTLEFQIKVSSLPMVRACYPPPQPHQKESSSNFSGVHVFSYAELEEATQNFDNSKDLGEEGFGTVYKGELREGPCLRHKNLVTLYGCTARHSRELLLVYEFIPNGTVADHLHGKRPKSTLLPWPVRLNIAKEIAEALAYLHASDVIHRDVKSNNILLNDKFHVKVADFGLSRLFPNNVTHVSTAPQGTPGYVDPEYHDCFQLSDKSDVYSFGVVLVELISSLHVLDFSRNDVILADMAVNKIQNQELHELVDPYLGSEKDYAVRQMTTEVAILAFRCLQRQRDMRPSMDEVLEILRGITSDEINTGKQK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00144 357 Gene3D Transferase(Phosphotransferase) domain 1 150 357 - -
Rops8g00144 357 SUPERFAMILY Protein kinase-like (PK-like) 74 347 IPR011009 -
Rops8g00144 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Rops8g00144 357 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 75 121 IPR044652 GO:0004672
Rops8g00144 357 FunFam Wall-associated receptor kinase-like 20 150 356 - -
Rops8g00144 357 Gene3D Phosphorylase Kinase; domain 1 70 124 - -
Rops8g00144 357 Pfam Protein kinase domain 123 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00144 357 ProSiteProfiles Protein kinase domain profile. 70 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00144 357 SMART serkin_6 99 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00144 Rops-Chr8 3327785 3339866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00144 76 350 Receptor kinase-like Gene Family AT1G25390 57.566 1.40e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops8g00144 Pkinase 8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00144 - - cam:101490779 424.476