Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00141 ATGAGTGAGTCCAAGGGAAGTGGAGAAGATTTCATAAACGAAGTTGTCAGTATTAGCAGAACTTCTCATGTGAATATTGTCTCACTTTTGGGATTTTGTTATGATATGAACAAAAGAGCACTGATTTATGAATTCCTGCCTAATGGTTCATTGGATAAATTCATCTATAGAAGGGGATCTCCAGATGCTATTTGTTTTTTTGATTGGAACACCTTGTACAAAGTTGCAATTGGGATTGCTCGAGGACTAGATTACTTACATCGAGGATGCAGAACAAGGATTTTACAACTTGATATTAAACCCCAAAATATTCTTTTGGATGAAGATTTTTGTCCAAAAATACCTGATTTTGGACTAACTAAAATATGCCAAAAGAAGGAGAGTGTGAGTGTTGAGTCTATATTGGGCACTCCAGGAACTCCAGGGTACATTGCCCCAGAAGTGTTTAGCCGAAAATTTGGCGGTGTATCTCACAAATCAGATGTGTATAGCTATGGCATGTTGATTCTTGAAATGGTTGGAGGAAGAAAGAATTATGATAGTGGAGGATCACAAACCACCAGTGAAATGTATTTTCCAGACTGGATTTATAAGGATCTTGAGCAAGGTACTAATCCCACCAATTATTTGGTCCACACAGAGGAGGAAAATGAGATGGCAAGGAAGATGACTTTGGTGAGTCTTTGGTGCATTCAAATACACCCATCAGATAGGCCATCAATGAGTAAAGTAGTGGAGATGTTGGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAGCCTGTCATAGATTCTCCTGAAAGGCTACTATTTCAATTTTCAGATAAATTTTCTGGTGAATGGTGA 846 0.3853 MSESKGSGEDFINEVVSISRTSHVNIVSLLGFCYDMNKRALIYEFLPNGSLDKFIYRRGSPDAICFFDWNTLYKVAIGIARGLDYLHRGCRTRILQLDIKPQNILLDEDFCPKIPDFGLTKICQKKESVSVESILGTPGTPGYIAPEVFSRKFGGVSHKSDVYSYGMLILEMVGGRKNYDSGGSQTTSEMYFPDWIYKDLEQGTNPTNYLVHTEEENEMARKMTLVSLWCIQIHPSDRPSMSKVVEMLEGPLQSVPYPPKPVIDSPERLLFQFSDKFSGEW* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00141 281 Gene3D Phosphorylase Kinase; domain 1 1 46 - -
Rops8g00141 281 Gene3D Transferase(Phosphotransferase) domain 1 47 255 - -
Rops8g00141 281 Pfam Protein kinase domain 7 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00141 281 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00141 281 FunFam PR5-like receptor kinase 46 258 - -
Rops8g00141 281 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00141 281 PIRSF ILK 1 256 - -
Rops8g00141 281 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 265 IPR045874 GO:0004672
Rops8g00141 281 SUPERFAMILY Protein kinase-like (PK-like) 7 248 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00141 Rops-Chr8 3300160 3301005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00141 4 270 Receptor kinase-like Gene Family AT5G38280 58.519 5.93e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Rops8g00141 Pkinase 1.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00141 - - aprc:113862598 432.18