Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00134 ATGGACCACATTGATTGGTGGTCTTATAATCCCCTAGCTTGGGTCCTTCCACAAGAAGACACGGGTTCCTCAACATACAAAGCTTGCATTTCAGCCATGAAGCTTATAGCTCGTGTTGCTCCTTGCTCCCTCATGGGTCCAAGTTGCGTGAACAAGTCCATGATCAGTGAAAGCTTACAAGATGTCTGCGAGATTGGCGGTATTGGTACTGTGCCTGTTGGACGTGTTGAGACCGGTACCTTGAAGCCTGGTATGGTTGGGACTTTCGATCCCACTGGGTTGGCAACTGAAGCTCGGTCCGTGGAGATGCACCACGAGGCTCTCCCAGGCGACAATGTGGGATTCAACGTGAAGAACGTTGCAGTCAAGGATCTCGAGCGTGGTTTTGTTGCACCCCAACTCAAAGGAGGACGCAAACCGCCGGAAACCTTGGAGAAGCGATATTTGACAGTGAGGTTGTGCCTTCTACTCTTGTCGAGATTGCACCTATTCTTCATGTGGCTAATGAGGTTGAGAAGACACATCCTAGAGTTGCTTATCTCTGCCGGTTTTACCCGTTTGAGAAAGCTCATAGACTGGACCCAACTTCAGGTGGTCGTGGTGTTCGTTAATTTAAGACCGCCCTTCTTCAGCGTCTGA 639 0.4992 MDHIDWWSYNPLAWVLPQEDTGSSTYKACISAMKLIARVAPCSLMGPSCVNKSMISESLQDVCEIGGIGTVPVGRVETGTLKPGMVGTFDPTGLATEARSVEMHHEALPGDNVGFNVKNVAVKDLERGFVAPQLKGGRKPPETLEKRYLTVRLCLLLLSRLHLFFMWLMRLRRHILELLISAGFTRLRKLIDWTQLQVVVVFVNLRPPFFSV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00134 212 Gene3D Translation factors 56 152 - -
Rops8g00134 212 PANTHER ELONGATION FACTOR 1 ALPHA 47 135 - -
Rops8g00134 212 CDD EF1_alpha_II 59 131 - -
Rops8g00134 212 SUPERFAMILY Translation proteins 59 132 IPR009000 -
Rops8g00134 212 Pfam Elongation factor Tu domain 2 69 130 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00134 Rops-Chr8 3173772 3174697 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00134 59 135 Eukaryotic Initiation Factors Gene Family AT5G60390 77.778 2.36e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00134 K03231 - mus:103969643 128.257