Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00129 ATGAAGCTCAGAGCTCGTGTTGCTCCTTGCTCCCTCATGGGTCCAAGTTGCGTGAACAAGTCCATGATCGGTGAAAGCTTACAAGATGTCTACGAGATTGGCGGTATTGGTATTGTGCCTGTTGGACGTGTTGAGACCGGTACCTTGAAGCCTGGTATGGTGGGGACTTTCGATCCCACAGGGTTGGCAACTAAAGCTCGGTCCGTGGAGATGCACCACGAGGCTCTCCCAGGTGACAATGTGGGATTCAACGTTAAGAACGTTGCAGTCAAGGATCTCGAACGTGGTTTTGTTGTACCCAACTCAAAGGAGGACGCAAACCGCTGGAAACCTTGGAGAAGCGATATTTAA 351 0.5071 MKLRARVAPCSLMGPSCVNKSMIGESLQDVYEIGGIGIVPVGRVETGTLKPGMVGTFDPTGLATKARSVEMHHEALPGDNVGFNVKNVAVKDLERGFVVPNSKEDANRWKPWRSDI* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00129 116 PANTHER ELONGATION FACTOR 1 ALPHA 25 107 - -
Rops8g00129 116 Pfam Elongation factor Tu domain 2 39 99 IPR004161 GO:0005525
Rops8g00129 116 Gene3D Translation factors 25 110 - -
Rops8g00129 116 CDD EF1_alpha_II 27 105 - -
Rops8g00129 116 SUPERFAMILY Translation proteins 27 103 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00129 Rops-Chr8 3014748 3015385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00129 27 105 Eukaryotic Initiation Factors Gene Family AT5G60390 77.108 2.42e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00129 K03231 - mus:103969643 123.635